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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183729661
PJTR01000005
284697
Alphaproteobacteria
GAA
Phe
>WENV183729677
PJTR01000011
366050
Alphaproteobacteria
CGC
Ala
>WENV183729707
PJTR01000026
73167
Alphaproteobacteria
GAG
Leu
>WENV183729741
PJTR01000040
225944
Alphaproteobacteria
CCT
Arg
>WENV183729757
PJTR01000056
178576
Alphaproteobacteria
ACG
Arg
>WENV183729758
PJTR01000056
178576
Alphaproteobacteria
ACG
Arg
>WENV183729804
PJTR01000089
101069
Alphaproteobacteria
TAA
Leu
>WENV183729806
PJTR01000089
178050
Alphaproteobacteria
GTG
His
>WENV183729816
PJTR01000094
179894
Alphaproteobacteria
CCG
Arg
>WENV183729829
PJTR01000100
13331
Alphaproteobacteria
GCT
Ser
>WENV183729842
PJTR01000113
400945
Alphaproteobacteria
GCC
Gly
>WENV183729906
PJTR01000170
469211
Alphaproteobacteria
>WENV183729907
PJTR01000172
285028
Alphaproteobacteria
CTT
Lys
>WENV183729947
PJTR01000231
118550
Alphaproteobacteria
GAG
Leu
>WENV183729950
PJTR01000231
400258
Alphaproteobacteria
>WENV183729958
PJTR01000242
284698
Alphaproteobacteria
TTT
Lys
>WENV183729959
PJTR01000243
304844
Alphaproteobacteria
TAC
Val
>WENV183729971
PJTR01000274
199536
Alphaproteobacteria
TGG
Pro
>WENV183730054
PJTR01000427
231487
Alphaproteobacteria
TCT
Arg
>WENV183730055
PJTR01000432
399340
Alphaproteobacteria
GTT
Asn
>WENV183730156
PJTR01001535
399340
Alphaproteobacteria
GTT
Asn
>WENV183730176
PJTR01002090
401056
Alphaproteobacteria
TTC
Glu
>WENV183730238
PJTR01006578
117819
Alphaproteobacteria
TAG
Leu
>WENV183730263
PJTR01009675
29417
Alphaproteobacteria
CGA
Ser
>WENV183730264
PJTR01009825
178423
Alphaproteobacteria
TCT
Arg
>WENV183730265
PJTR01010036
29662
Alphaproteobacteria
GCT
Ser
>WENV183730277
PJTR01013112
176230
Alphaproteobacteria
CGG
Pro
>WENV183730278
PJTR01013208
413431
Alphaproteobacteria
TTC
Glu
>WENV183730284
PJTR01014531
13331
Alphaproteobacteria
GCT
Ser
>WENV183730288
PJTR01015758
315952
Alphaproteobacteria
GAA
Phe
>WENV183730306
PJTR01018011
282749
Alphaproteobacteria
CGC
Ala
>WENV183730359
PJTR01032437
400249
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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