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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183730369
PJTS01000001
73523
Alphaproteobacteria
CAG
Leu
>WENV183730375
PJTS01000001
337513
Alphaproteobacteria
TGT
Thr
>WENV183730380
PJTS01000001
282748
Alphaproteobacteria
CGT
Thr
>WENV183730386
PJTS01000003
282977
Alphaproteobacteria
CAT
Met
>WENV183730404
PJTS01000005
77010
Alphaproteobacteria
GAG
Leu
>WENV183730405
PJTS01000005
283392
Alphaproteobacteria
TTT
Lys
>WENV183730406
PJTS01000005
287439
Alphaproteobacteria
CCA
Trp
>WENV183730407
PJTS01000007
284697
Alphaproteobacteria
GAA
Phe
>WENV183730412
PJTS01000009
184097
Alphaproteobacteria
CCT
Arg
>WENV183730420
PJTS01000012
73167
Alphaproteobacteria
GAG
Leu
>WENV183730448
PJTS01000024
178576
Alphaproteobacteria
ACG
Arg
>WENV183730449
PJTS01000024
178576
Alphaproteobacteria
ACG
Arg
>WENV183730475
PJTS01000049
399340
Alphaproteobacteria
GTT
Asn
>WENV183730476
PJTS01000049
403581
Alphaproteobacteria
TTG
Gln
>WENV183730485
PJTS01000053
179894
Alphaproteobacteria
CCG
Arg
>WENV183730506
PJTS01000079
400517
Alphaproteobacteria
GGT
Thr
>WENV183730508
PJTS01000080
101069
Alphaproteobacteria
TAA
Leu
>WENV183730510
PJTS01000080
178050
Alphaproteobacteria
GTG
His
>WENV183730537
PJTS01000112
403836
Alphaproteobacteria
>WENV183730612
PJTS01000193
284698
Alphaproteobacteria
TTT
Lys
>WENV183730644
PJTS01000251
199536
Alphaproteobacteria
TGG
Pro
>WENV183730672
PJTS01000313
225944
Alphaproteobacteria
CCT
Arg
>WENV183730709
PJTS01000373
231487
Alphaproteobacteria
TCT
Arg
>WENV183730711
PJTS01000381
399340
Alphaproteobacteria
GTT
Asn
>WENV183730795
PJTS01000796
13331
Alphaproteobacteria
GCT
Ser
>WENV183730869
PJTS01001571
400186
Alphaproteobacteria
GTT
Asn
>WENV183730873
PJTS01001631
400190
Alphaproteobacteria
>WENV183730890
PJTS01001795
480946
Alphaproteobacteria
TTG
Gln
>WENV183730891
PJTS01001816
427571
Alphaproteobacteria
GCC
Gly
>WENV183730894
PJTS01001846
178197
Alphaproteobacteria
CAT
Met
>WENV183730903
PJTS01001896
178198
Alphaproteobacteria
TTT
Lys
>WENV183730905
PJTS01001982
13311
Alphaproteobacteria
GCT
Ser
>WENV183730918
PJTS01002015
400188
Alphaproteobacteria
CCC
Gly
>WENV183730923
PJTS01002084
282923
Alphaproteobacteria
CTT
Lys
>WENV183730934
PJTS01002224
281659
Alphaproteobacteria
TGC
Ala
>WENV183730943
PJTS01002332
301758
Alphaproteobacteria
GAA
Phe
>WENV183730944
PJTS01002411
209657
Alphaproteobacteria
TAC
Val
>WENV183730945
PJTS01002434
118136
Alphaproteobacteria
CAA
Leu
>WENV183730958
PJTS01002697
29598
Alphaproteobacteria
GGA
Ser
>WENV183730972
PJTS01002884
340918
Alphaproteobacteria
CGT
Thr
>WENV183730978
PJTS01002986
400069
Alphaproteobacteria
CAC
Val
>WENV183730990
PJTS01003459
282924
Alphaproteobacteria
CGC
Ala
>WENV183730997
PJTS01003563
29645
Alphaproteobacteria
CGA
Ser
>WENV183730998
PJTS01003566
234327
Alphaproteobacteria
GAT
Ile
>WENV183731005
PJTS01003643
399340
Alphaproteobacteria
GTT
Asn
>WENV183731018
PJTS01003750
353624
Alphaproteobacteria
CCA
Trp
>WENV183731020
PJTS01004004
413432
Alphaproteobacteria
GGT
Thr
>WENV183731039
PJTS01004626
480392
Alphaproteobacteria
GCA
Cys
>WENV183731042
PJTS01004901
298198
Alphaproteobacteria
TAC
Val
>WENV183731107
PJTS01009540
398996
Alphaproteobacteria
GCC
Gly
>WENV183731140
PJTS01012677
350583
Alphaproteobacteria
TAC
Val
>WENV183731163
PJTS01014649
430786
Alphaproteobacteria
TGT
Thr
>WENV183731225
PJTS01021848
482902
Alphaproteobacteria
TCC
Gly
>WENV183731226
PJTS01022568
29470
Alphaproteobacteria
TGA
Ser
>WENV183731250
PJTS01027344
401056
Alphaproteobacteria
TTC
Glu
>WENV183731262
PJTS01028937
117918
Alphaproteobacteria
CAA
Leu
>WENV183731294
PJTS01033756
419842
Alphaproteobacteria
GCC
Gly
>WENV183731355
PJTS01043188
29610
Alphaproteobacteria
TGA
Ser
>WENV183731361
PJTS01043567
158526
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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