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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183732642
PJTX01004506
284733
Alphaproteobacteria
TGC
Ala
>WENV183732520
PJTX01001441
30668
Alphaproteobacteria
CGA
Ser
>WENV183732720
PJTX01008419
188085
Alphaproteobacteria
GTC
Asp
>WENV183732596
PJTX01003023
178050
Alphaproteobacteria
GTG
His
>WENV183732780
PJTX01013501
298198
Alphaproteobacteria
TAC
Val
>WENV183732752
PJTX01010378
400258
Alphaproteobacteria
>WENV183732829
PJTX01019547
191064
Alphaproteobacteria
CCG
Arg
>WENV183732767
PJTX01011876
100353
Alphaproteobacteria
GTA
Tyr
>WENV183732731
PJTX01008997
480418
Alphaproteobacteria
GCA
Cys
>WENV183732522
PJTX01001453
285028
Alphaproteobacteria
CTT
Lys
>WENV183732755
PJTX01010702
280784
Alphaproteobacteria
TGC
Ala
>WENV183732437
PJTX01000259
282748
Alphaproteobacteria
CGT
Thr
>WENV183732714
PJTX01007731
403836
Alphaproteobacteria
>WENV183732571
PJTX01002611
399340
Alphaproteobacteria
GTT
Asn
>WENV183732709
PJTX01007425
283321
Alphaproteobacteria
CGT
Thr
>WENV183732654
PJTX01004990
140932
Alphaproteobacteria
>WENV183732485
PJTX01000967
400945
Alphaproteobacteria
GCC
Gly
>WENV183732703
PJTX01007034
101069
Alphaproteobacteria
TAA
Leu
>WENV183732526
PJTX01001571
404744
Alphaproteobacteria
GCC
Gly
>WENV183732891
PJTX01034004
404744
Alphaproteobacteria
GCC
Gly
>WENV183732799
PJTX01015540
73167
Alphaproteobacteria
GAG
Leu
>WENV183732776
PJTX01012837
398998
Alphaproteobacteria
TTG
Gln
>WENV183732846
PJTX01023234
156060
Alphaproteobacteria
GGG
Pro
>WENV183732645
PJTX01004670
281650
Alphaproteobacteria
CCA
Trp
>WENV183732832
PJTX01019705
29408
Alphaproteobacteria
CGA
Ser
>WENV183732740
PJTX01009878
284698
Alphaproteobacteria
TTT
Lys
>WENV183732800
PJTX01015677
282658
Alphaproteobacteria
CGT
Thr
>WENV183732815
PJTX01017638
29417
Alphaproteobacteria
CGA
Ser
>WENV183732788
PJTX01014762
480392
Alphaproteobacteria
GCA
Cys
>WENV183732802
PJTX01016110
73721
Alphaproteobacteria
GAG
Leu
>WENV183732648
PJTX01004823
399408
Alphaproteobacteria
TGT
Thr
>WENV183732679
PJTX01006104
480900
Alphaproteobacteria
GCA
Cys
>WENV183732487
PJTX01000988
178576
Alphaproteobacteria
ACG
Arg
>WENV183732488
PJTX01000988
178576
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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