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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183742336
PJUH01010244
176233
Alphaproteobacteria
>WENV183742410
PJUH01026677
399044
Alphaproteobacteria
>WENV183742286
PJUH01006204
119323
Alphaproteobacteria
CAA
Leu
>WENV183742401
PJUH01025168
117918
Alphaproteobacteria
CAA
Leu
>WENV183742385
PJUH01020525
195445
Alphaproteobacteria
CAT
Met
>WENV183742281
PJUH01005833
353624
Alphaproteobacteria
CCA
Trp
>WENV183742418
PJUH01029529
400246
Alphaproteobacteria
CCC
Gly
>WENV183742399
PJUH01024621
184480
Alphaproteobacteria
CCT
Arg
>WENV183742357
PJUH01014809
283023
Alphaproteobacteria
CGC
Ala
>WENV183742388
PJUH01021373
178299
Alphaproteobacteria
CGG
Pro
>WENV183742291
PJUH01006564
282748
Alphaproteobacteria
CGT
Thr
>WENV183742412
PJUH01028122
480416
Alphaproteobacteria
CTG
Gln
>WENV183742317
PJUH01007931
315952
Alphaproteobacteria
GAA
Phe
>WENV183742332
PJUH01009810
354296
Alphaproteobacteria
TAC
Val
>WENV183742368
PJUH01016978
117819
Alphaproteobacteria
TAG
Leu
>WENV183742330
PJUH01009563
183939
Alphaproteobacteria
TCT
Arg
>WENV183742273
PJUH01005161
29874
Alphaproteobacteria
TGA
Ser
>WENV183742425
PJUH01031355
176225
Alphaproteobacteria
TGG
Pro
>WENV183742349
PJUH01011865
283024
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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