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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183227255
OLQP01000002
59312
Bacillota
CAG
Leu
>WENV183227317
OLQP01000021
59312
Bacillota
CAG
Leu
>WENV183227323
OLQP01000025
59312
Bacillota
CAG
Leu
>WENV183227252
OLQP01000002
338147
Bacillota
CTC
Glu
>WENV183227253
OLQP01000002
44859
Bacillota
AAG
Leu
>WENV183227254
OLQP01000002
44859
Bacillota
AAG
Leu
>WENV183227271
OLQP01000007
155089
Bacillota
CAT
Met
>WENV183227309
OLQP01000017
152492
Bacillota
GGG
Pro
>WENV183227301
OLQP01000013
240017
Bacillota
GCC
Gly
>WENV183227349
OLQP01000047
147684
Bacillota
ACG
Arg
>WENV183227345
OLQP01000039
147684
Bacillota
ACG
Arg
>WENV183227336
OLQP01000033
235142
Bacillota
CTT
Lys
>WENV183227340
OLQP01000036
245386
Bacillota
CCA
Trp
>WENV183227424
OLQP01000105
235127
Bacillota
TTT
Lys
>WENV183227300
OLQP01000013
249522
Bacillota
TAC
Val
>WENV183227324
OLQP01000026
235113
Bacillota
GAA
Phe
>WENV183227416
OLQP01000097
95563
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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