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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
175 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183511722
OMJG01002565
289392
Bacillota
AGT
Thr
>WENV183511878
OMJG01009023
297707
Bacillota
GTG
His
>WENV183511728
OMJG01002643
400099
Bacillota
TTG
Gln
>WENV183511753
OMJG01003094
400099
Bacillota
TTG
Gln
>WENV183511590
OMJG01000921
283494
Bacillota
GTT
Asn
>WENV183511566
OMJG01000792
56454
Bacillota
CAA
Leu
>WENV183511767
OMJG01003480
179349
Bacillota
CAT
Met
>WENV183511975
OMJG01027207
178427
Bacillota
CAT
Met
>WENV183511390
OMJG01000158
46769
Bacillota
AAG
Leu
>WENV183511939
OMJG01018395
121003
Bacillota
CAA
Leu
>WENV183511488
OMJG01000450
399106
Bacillota
CTG
Gln
>WENV183511875
OMJG01009023
297706
Bacillota
GAA
Phe
>WENV183511693
OMJG01002098
140922
Bacillota
GTA
Tyr
>WENV183511792
OMJG01004575
284108
Bacillota
GGC
Ala
>WENV183511892
OMJG01009911
20870
Bacillota
CGA
Ser
>WENV183511397
OMJG01000176
178950
Bacillota
TCT
Arg
>WENV183511888
OMJG01009318
480451
Bacillota
GCA
Cys
>WENV183511587
OMJG01000891
282728
Bacillota
AGT
Thr
>WENV183511619
OMJG01001097
481078
Bacillota
TCC
Gly
>WENV183511855
OMJG01006431
481078
Bacillota
TCC
Gly
>WENV183511891
OMJG01009857
481078
Bacillota
TCC
Gly
>WENV183511669
OMJG01001675
399108
Bacillota
TTC
Glu
>WENV183511876
OMJG01009023
141710
Bacillota
GTA
Tyr
>WENV183511982
OMJG01033046
282732
Bacillota
CTG
Gln
>WENV183511437
OMJG01000317
191457
Bacillota
GAT
Ile
>WENV183511546
OMJG01000740
178107
Bacillota
GGT
Thr
>WENV183511489
OMJG01000450
399105
Bacillota
TTC
Glu
>WENV183511518
OMJG01000577
399105
Bacillota
TTC
Glu
>WENV183511603
OMJG01000994
283762
Bacillota
CCT
Arg
>WENV183511388
OMJG01000158
100095
Bacillota
GTA
Tyr
>WENV183511593
OMJG01000921
100095
Bacillota
GTA
Tyr
>WENV183511727
OMJG01002643
100095
Bacillota
GTA
Tyr
>WENV183511752
OMJG01003094
100095
Bacillota
GTA
Tyr
>WENV183511616
OMJG01001068
297684
Bacillota
CGT
Thr
>WENV183511938
OMJG01018395
481384
Bacillota
GCA
Cys
>WENV183511715
OMJG01002465
184214
Bacillota
GTC
Asp
>WENV183511438
OMJG01000317
184086
Bacillota
GTT
Asn
>WENV183511868
OMJG01007655
191485
Bacillota
CAT
Met
>WENV183511661
OMJG01001584
297689
Bacillota
TTG
Gln
>WENV183511784
OMJG01004099
297689
Bacillota
TTG
Gln
>WENV183511476
OMJG01000419
117846
Bacillota
TAG
Leu
>WENV183511836
OMJG01005818
400752
Bacillota
GTT
Asn
>WENV183511398
OMJG01000179
178106
Bacillota
TCT
Arg
>WENV183511361
OMJG01000088
481167
Bacillota
GCA
Cys
>WENV183511872
OMJG01008623
284104
Bacillota
CGT
Thr
>WENV183511726
OMJG01002643
282727
Bacillota
CGT
Thr
>WENV183511928
OMJG01014950
400102
Bacillota
CCG
Arg
>WENV183511389
OMJG01000158
400139
Bacillota
TTG
Gln
>WENV183511591
OMJG01000921
400645
Bacillota
TTC
Glu
>WENV183511307
OMJG01000021
184171
Bacillota
CAT
Met
>WENV183511434
OMJG01000317
184171
Bacillota
CAT
Met
>WENV183511449
OMJG01000356
184171
Bacillota
CAT
Met
>WENV183511450
OMJG01000356
184171
Bacillota
CAT
Met
>WENV183511795
OMJG01004728
20358
Bacillota
CGA
Ser
>WENV183511718
OMJG01002465
184215
Bacillota
GAT
Ile
>WENV183511563
OMJG01000792
481432
Bacillota
CCA
Trp
>WENV183511764
OMJG01003384
283734
Bacillota
GGT
Thr
>WENV183511704
OMJG01002284
178104
Bacillota
CCT
Arg
>WENV183511935
OMJG01017335
282816
Bacillota
GTT
Asn
>WENV183511851
OMJG01006316
282868
Bacillota
GTG
His
>WENV183511879
OMJG01009023
409138
Bacillota
TTG
Gln
>WENV183511977
OMJG01027802
58173
Bacillota
AAG
Leu
>WENV183511492
OMJG01000450
280997
Bacillota
CGT
Thr
>WENV183511604
OMJG01000995
280998
Bacillota
CCT
Arg
>WENV183511519
OMJG01000585
283440
Bacillota
>WENV183511755
OMJG01003121
283440
Bacillota
>WENV183511420
OMJG01000272
280995
Bacillota
CTT
Lys
>WENV183511487
OMJG01000449
280995
Bacillota
CTT
Lys
>WENV183511486
OMJG01000446
183970
Bacillota
GTT
Asn
>WENV183511547
OMJG01000741
183970
Bacillota
GTT
Asn
>WENV183511787
OMJG01004280
400141
Bacillota
CTG
Gln
>WENV183511708
OMJG01002406
76404
Bacillota
CAA
Leu
>WENV183511912
OMJG01012872
76404
Bacillota
CAA
Leu
>WENV183511552
OMJG01000760
480449
Bacillota
CCA
Trp
>WENV183511758
OMJG01003222
289400
Bacillota
CCT
Arg
>WENV183511766
OMJG01003469
289400
Bacillota
CCT
Arg
>WENV183511553
OMJG01000760
280993
Bacillota
GTG
His
>WENV183511362
OMJG01000090
283760
Bacillota
GGT
Thr
>WENV183511799
OMJG01004841
73084
Bacillota
CAG
Leu
>WENV183511983
OMJG01033651
56321
Bacillota
AAG
Leu
>WENV183511400
OMJG01000186
179130
Bacillota
ACG
Arg
>WENV183511803
OMJG01005052
481244
Bacillota
CCC
Gly
>WENV183511972
OMJG01026856
288953
Bacillota
GGT
Thr
>WENV183511393
OMJG01000168
284016
Bacillota
CTT
Lys
>WENV183511394
OMJG01000173
282811
Bacillota
CTC
Glu
>WENV183511608
OMJG01001046
178105
Bacillota
ACG
Arg
>WENV183511564
OMJG01000792
283736
Bacillota
GTG
His
>WENV183511663
OMJG01001597
20460
Bacillota
GCT
Ser
>WENV183511621
OMJG01001136
400142
Bacillota
CCG
Arg
>WENV183511576
OMJG01000815
20250
Bacillota
GCT
Ser
>WENV183511472
OMJG01000416
99888
Bacillota
GTA
Tyr
>WENV183511574
OMJG01000815
99888
Bacillota
GTA
Tyr
>WENV183511592
OMJG01000921
285948
Bacillota
CGT
Thr
>WENV183511710
OMJG01002422
289398
Bacillota
GTT
Asn
>WENV183511791
OMJG01004575
284107
Bacillota
CGC
Ala
>WENV183511422
OMJG01000276
399102
Bacillota
GTT
Asn
>WENV183511656
OMJG01001512
399102
Bacillota
GTT
Asn
>WENV183511670
OMJG01001698
400100
Bacillota
GTT
Asn
>WENV183511902
OMJG01011030
178948
Bacillota
CTC
Glu
>WENV183511869
OMJG01008286
179263
Bacillota
TCT
Arg
>WENV183511845
OMJG01005903
282731
Bacillota
GTG
His
>WENV183511943
OMJG01019508
283727
Bacillota
TGC
Ala
>WENV183511915
OMJG01013369
409141
Bacillota
TTC
Glu
>WENV183511536
OMJG01000688
480917
Bacillota
CCC
Gly
>WENV183511490
OMJG01000450
280996
Bacillota
GTT
Asn
>WENV183511491
OMJG01000450
280996
Bacillota
GTT
Asn
>WENV183511685
OMJG01001861
56453
Bacillota
AAG
Leu
>WENV183511615
OMJG01001068
282809
Bacillota
GTT
Asn
>WENV183511577
OMJG01000831
29760
Bacillota
CGA
Ser
>WENV183511513
OMJG01000553
400073
Bacillota
GCA
Cys
>WENV183511688
OMJG01001963
178717
Bacillota
TCT
Arg
>WENV183511849
OMJG01006107
155801
Bacillota
GTC
Asp
>WENV183511453
OMJG01000370
400614
Bacillota
CCG
Arg
>WENV183511964
OMJG01024315
58172
Bacillota
CAA
Leu
>WENV183511522
OMJG01000597
183953
Bacillota
GTC
Asp
>WENV183511658
OMJG01001542
178047
Bacillota
TCT
Arg
>WENV183511720
OMJG01002531
178047
Bacillota
TCT
Arg
>WENV183511586
OMJG01000891
118091
Bacillota
TAG
Leu
>WENV183511306
OMJG01000019
178972
Bacillota
TCT
Arg
>WENV183511525
OMJG01000597
176324
Bacillota
GAT
Ile
>WENV183511607
OMJG01001046
5737
Bacillota
GGA
Ser
>WENV183511439
OMJG01000326
100225
Bacillota
CAG
Leu
>WENV183511719
OMJG01002465
20899
Bacillota
GCT
Ser
>WENV183511976
OMJG01027492
297716
Bacillota
TAC
Val
>WENV183511788
OMJG01004336
13241
Bacillota
CGA
Ser
>WENV183511959
OMJG01023457
400626
Bacillota
CCG
Arg
>WENV183511716
OMJG01002465
297691
Bacillota
GAA
Phe
>WENV183511748
OMJG01003031
20461
Bacillota
GGA
Ser
>WENV183511375
OMJG01000115
297666
Bacillota
CTT
Lys
>WENV183511772
OMJG01003532
283735
Bacillota
TTC
Glu
>WENV183511585
OMJG01000871
297682
Bacillota
>WENV183511717
OMJG01002465
403908
Bacillota
TCC
Gly
>WENV183511835
OMJG01005750
119281
Bacillota
>WENV183511723
OMJG01002565
191480
Bacillota
ACG
Arg
>WENV183511682
OMJG01001833
176326
Bacillota
CAT
Met
>WENV183511854
OMJG01006364
73616
Bacillota
CAA
Leu
>WENV183511761
OMJG01003360
403907
Bacillota
TTC
Glu
>WENV183511292
OMJG01000007
47846
Bacillota
AAG
Leu
>WENV183511402
OMJG01000186
47846
Bacillota
AAG
Leu
>WENV183511942
OMJG01019508
179264
Bacillota
GAT
Ile
>WENV183511877
OMJG01009023
484943
Bacillota
CCA
Trp
>WENV183511378
OMJG01000119
283761
Bacillota
CGT
Thr
>WENV183511531
OMJG01000660
284848
Bacillota
CCT
Arg
>WENV183511410
OMJG01000220
178952
Bacillota
CGG
Pro
>WENV183511709
OMJG01002422
289399
Bacillota
CGT
Thr
>WENV183511967
OMJG01025110
73405
Bacillota
CAA
Leu
>WENV183511426
OMJG01000285
399104
Bacillota
CTC
Glu
>WENV183511495
OMJG01000468
176325
Bacillota
TTT
Lys
>WENV183511473
OMJG01000416
399103
Bacillota
TTG
Gln
>WENV183511575
OMJG01000815
399103
Bacillota
TTG
Gln
>WENV183511804
OMJG01005072
400480
Bacillota
CCA
Trp
>WENV183511927
OMJG01014833
74812
Bacillota
TAA
Leu
>WENV183511474
OMJG01000416
399107
Bacillota
>WENV183511523
OMJG01000597
280994
Bacillota
GAA
Phe
>WENV183511521
OMJG01000597
8520
Bacillota
>WENV183511830
OMJG01005527
74100
Bacillota
CAG
Leu
>WENV183511773
OMJG01003559
297694
Bacillota
CTT
Lys
>WENV183511864
OMJG01007339
297694
Bacillota
CTT
Lys
>WENV183511567
OMJG01000792
73609
Bacillota
CAG
Leu
>WENV183511932
OMJG01015725
8644
Bacillota
GGA
Ser
>WENV183511296
OMJG01000013
183839
Bacillota
TCT
Arg
>WENV183511524
OMJG01000597
480450
Bacillota
TCC
Gly
>WENV183511775
OMJG01003560
400599
Bacillota
CCG
Arg
>WENV183511309
OMJG01000022
141184
Bacillota
GTA
Tyr
>WENV183511475
OMJG01000416
56119
Bacillota
AAG
Leu
>WENV183511399
OMJG01000186
47847
Bacillota
TAA
Leu
>WENV183511979
OMJG01028599
408869
Bacillota
CTC
Glu
>WENV183511934
OMJG01016284
176321
Bacillota
TCT
Arg
>WENV183511744
OMJG01002915
481173
Bacillota
CTG
Gln
>WENV183511425
OMJG01000285
73082
Bacillota
CAA
Leu
>WENV183511554
OMJG01000760
73082
Bacillota
CAA
Leu
>WENV183511931
OMJG01015521
282734
Bacillota
GGT
Thr
>WENV183511781
OMJG01003804
73390
Bacillota
CAG
Leu
>WENV183511444
OMJG01000340
47133
Bacillota
AAG
Leu
>WENV183511627
OMJG01001195
47133
Bacillota
AAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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