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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183551621
OOBJ01000007
405393
Bacillota
GCC
Gly
>WENV183551745
OOBJ01000048
289475
Bacillota
GTG
His
>WENV183551747
OOBJ01000048
289745
Bacillota
TTT
Lys
>WENV183551746
OOBJ01000048
403766
Bacillota
TTG
Gln
>WENV183551758
OOBJ01000053
452735
Bacillota
GCC
Gly
>WENV183551759
OOBJ01000053
333281
Bacillota
GTT
Asn
>WENV183551761
OOBJ01000053
289745
Bacillota
TTT
Lys
>WENV183551776
OOBJ01000056
295166
Bacillota
TGC
Ala
>WENV183551774
OOBJ01000056
289123
Bacillota
GGT
Thr
>WENV183551811
OOBJ01000086
452735
Bacillota
GCC
Gly
>WENV183551809
OOBJ01000086
184455
Bacillota
GTC
Asp
>WENV183551813
OOBJ01000086
48832
Bacillota
TAA
Leu
>WENV183551812
OOBJ01000086
489283
Bacillota
GCA
Cys
>WENV183551822
OOBJ01000098
186123
Bacillota
GTC
Asp
>WENV183551823
OOBJ01000098
291634
Bacillota
GAA
Phe
>WENV183551843
OOBJ01000123
184455
Bacillota
GTC
Asp
>WENV183551863
OOBJ01000138
183994
Bacillota
TCT
Arg
>WENV183551864
OOBJ01000138
404085
Bacillota
CCG
Arg
>WENV183551861
OOBJ01000138
208539
Bacillota
TGG
Pro
>WENV183551938
OOBJ01000284
510477
Bacillota
TCC
Gly
>WENV183551939
OOBJ01000284
184539
Bacillota
TCT
Arg
>WENV183551966
OOBJ01000314
183995
Bacillota
GGG
Pro
>WENV183551967
OOBJ01000315
303718
Bacillota
TGT
Thr
>WENV183551982
OOBJ01000348
184522
Bacillota
CCT
Arg
>WENV183551999
OOBJ01000410
346451
Bacillota
TTT
Lys
>WENV183552070
OOBJ01000649
56079
Bacillota
AAG
Leu
>WENV183552135
OOBJ01001006
47166
Bacillota
CGA
Ser
>WENV183552140
OOBJ01001025
186123
Bacillota
GTC
Asp
>WENV183552141
OOBJ01001025
405393
Bacillota
GCC
Gly
>WENV183552149
OOBJ01001066
241041
Bacillota
CGG
Pro
>WENV183552182
OOBJ01001269
480324
Bacillota
TTG
Gln
>WENV183552206
OOBJ01001476
398852
Bacillota
CTC
Glu
>WENV183552212
OOBJ01001550
20913
Bacillota
GCT
Ser
>WENV183552224
OOBJ01001682
73664
Bacillota
CAG
Leu
>WENV183552239
OOBJ01001848
175868
Bacillota
GTT
Asn
>WENV183552241
OOBJ01001862
280444
Bacillota
GGT
Thr
>WENV183552280
OOBJ01002180
231532
Bacillota
ACG
Arg
>WENV183552279
OOBJ01002180
289474
Bacillota
CCA
Trp
>WENV183552284
OOBJ01002216
398833
Bacillota
TGT
Thr
>WENV183552291
OOBJ01002284
183993
Bacillota
CAT
Met
>WENV183552290
OOBJ01002284
289149
Bacillota
GGT
Thr
>WENV183552300
OOBJ01002415
480322
Bacillota
CTG
Gln
>WENV183552310
OOBJ01002563
480324
Bacillota
TTG
Gln
>WENV183552342
OOBJ01003084
289154
Bacillota
CTT
Lys
>WENV183552370
OOBJ01003871
480322
Bacillota
CTG
Gln
>WENV183552376
OOBJ01003940
280473
Bacillota
TGG
Pro
>WENV183552381
OOBJ01004103
73009
Bacillota
CAG
Leu
>WENV183552383
OOBJ01004128
46643
Bacillota
TGA
Ser
>WENV183552387
OOBJ01004244
190476
Bacillota
CAT
Met
>WENV183552388
OOBJ01004244
398832
Bacillota
TTC
Glu
>WENV183552397
OOBJ01004335
175859
Bacillota
TCT
Arg
>WENV183552408
OOBJ01004752
481217
Bacillota
GCA
Cys
>WENV183552413
OOBJ01004919
280428
Bacillota
GAA
Phe
>WENV183552414
OOBJ01004922
175831
Bacillota
ACG
Arg
>WENV183552427
OOBJ01005466
291581
Bacillota
CGG
Pro
>WENV183552426
OOBJ01005466
480322
Bacillota
CTG
Gln
>WENV183552438
OOBJ01005943
291576
Bacillota
CCC
Gly
>WENV183552440
OOBJ01006052
175842
Bacillota
CAC
Val
>WENV183552460
OOBJ01007033
56074
Bacillota
TGA
Ser
>WENV183552492
OOBJ01008011
280473
Bacillota
TGG
Pro
>WENV183552497
OOBJ01008368
117745
Bacillota
GTA
Tyr
>WENV183552525
OOBJ01010091
291576
Bacillota
CCC
Gly
>WENV183552538
OOBJ01011198
179755
Bacillota
CCG
Arg
>WENV183552552
OOBJ01011949
175868
Bacillota
GTT
Asn
>WENV183552551
OOBJ01011949
398854
Bacillota
CTC
Glu
>WENV183552553
OOBJ01011983
280447
Bacillota
GAC
Val
>WENV183552554
OOBJ01012003
401685
Bacillota
TTG
Gln
>WENV183552575
OOBJ01012919
183879
Bacillota
GAT
Ile
>WENV183552577
OOBJ01013167
291581
Bacillota
CGG
Pro
>WENV183552576
OOBJ01013167
480322
Bacillota
CTG
Gln
>WENV183552587
OOBJ01014313
280447
Bacillota
GAC
Val
>WENV183552596
OOBJ01014939
175859
Bacillota
TCT
Arg
>WENV183552598
OOBJ01015096
280444
Bacillota
GGT
Thr
>WENV183552619
OOBJ01017158
406553
Bacillota
TTG
Gln
>WENV183552622
OOBJ01017306
99852
Bacillota
GTA
Tyr
>WENV183552631
OOBJ01017816
405363
Bacillota
GCA
Cys
>WENV183552649
OOBJ01019362
280447
Bacillota
GAC
Val
>WENV183552732
OOBJ01029517
179176
Bacillota
ACG
Arg
>WENV183552791
OOBJ01043440
201856
Bacillota
GAT
Ile
>WENV183552796
OOBJ01046312
46835
Bacillota
TAA
Leu
>WENV183552807
OOBJ01052022
291597
Bacillota
TGC
Ala
>WENV183552845
OOBJ01067907
448939
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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