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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183552879
OOBK01000006
117745
Bacillota
GTA
Tyr
>WENV183552912
OOBK01000026
291576
Bacillota
CCC
Gly
>WENV183552926
OOBK01000041
398852
Bacillota
CTC
Glu
>WENV183552981
OOBK01000144
497729
Bacillota
CCA
Trp
>WENV183553004
OOBK01000204
398852
Bacillota
CTC
Glu
>WENV183553028
OOBK01000250
175859
Bacillota
TCT
Arg
>WENV183553030
OOBK01000254
46643
Bacillota
TGA
Ser
>WENV183553039
OOBK01000268
175831
Bacillota
ACG
Arg
>WENV183553050
OOBK01000305
5692
Bacillota
GCT
Ser
>WENV183553049
OOBK01000305
56074
Bacillota
TGA
Ser
>WENV183553053
OOBK01000318
175857
Bacillota
GTG
His
>WENV183553066
OOBK01000358
285947
Bacillota
CTG
Gln
>WENV183553067
OOBK01000358
369718
Bacillota
CTC
Glu
>WENV183553070
OOBK01000369
190476
Bacillota
CAT
Met
>WENV183553071
OOBK01000369
398832
Bacillota
TTC
Glu
>WENV183553079
OOBK01000387
5692
Bacillota
GCT
Ser
>WENV183553078
OOBK01000387
56074
Bacillota
TGA
Ser
>WENV183553089
OOBK01000453
280476
Bacillota
TTT
Lys
>WENV183553099
OOBK01000516
343590
Bacillota
GCC
Gly
>WENV183553100
OOBK01000516
343590
Bacillota
GCC
Gly
>WENV183553101
OOBK01000520
480324
Bacillota
TTG
Gln
>WENV183553102
OOBK01000524
284627
Bacillota
GAA
Phe
>WENV183553110
OOBK01000565
73009
Bacillota
CAG
Leu
>WENV183553111
OOBK01000566
356660
Bacillota
CTT
Lys
>WENV183553123
OOBK01000642
179755
Bacillota
CCG
Arg
>WENV183553126
OOBK01000672
175868
Bacillota
GTT
Asn
>WENV183553132
OOBK01000707
291576
Bacillota
CCC
Gly
>WENV183553144
OOBK01000733
56397
Bacillota
CAA
Leu
>WENV183553139
OOBK01000733
407852
Bacillota
TTC
Glu
>WENV183553143
OOBK01000733
282731
Bacillota
GTG
His
>WENV183553142
OOBK01000733
480918
Bacillota
>WENV183553141
OOBK01000733
105208
Bacillota
GTA
Tyr
>WENV183553138
OOBK01000733
21320
Bacillota
GCT
Ser
>WENV183553149
OOBK01000780
73009
Bacillota
CAG
Leu
>WENV183553152
OOBK01000802
284723
Bacillota
TAC
Val
>WENV183553153
OOBK01000802
187364
Bacillota
CAT
Met
>WENV183553164
OOBK01000834
280492
Bacillota
CTT
Lys
>WENV183553183
OOBK01000968
175831
Bacillota
ACG
Arg
>WENV183553190
OOBK01001062
280447
Bacillota
GAC
Val
>WENV183553192
OOBK01001087
99852
Bacillota
GTA
Tyr
>WENV183553197
OOBK01001121
291581
Bacillota
CGG
Pro
>WENV183553196
OOBK01001121
480322
Bacillota
CTG
Gln
>WENV183553200
OOBK01001138
175842
Bacillota
CAC
Val
>WENV183553211
OOBK01001310
21311
Bacillota
GCT
Ser
>WENV183553221
OOBK01001383
99852
Bacillota
GTA
Tyr
>WENV183553220
OOBK01001383
398833
Bacillota
TGT
Thr
>WENV183553237
OOBK01001432
187706
Bacillota
TGG
Pro
>WENV183553231
OOBK01001432
285945
Bacillota
TTT
Lys
>WENV183553230
OOBK01001432
282730
Bacillota
TAC
Val
>WENV183553236
OOBK01001432
238199
Bacillota
ACG
Arg
>WENV183553238
OOBK01001432
179243
Bacillota
CGG
Pro
>WENV183553233
OOBK01001432
294385
Bacillota
TGT
Thr
>WENV183553229
OOBK01001432
330582
Bacillota
GTC
Asp
>WENV183553235
OOBK01001432
52553
Bacillota
TAA
Leu
>WENV183553248
OOBK01001521
290391
Bacillota
TAC
Val
>WENV183553247
OOBK01001521
180688
Bacillota
GTC
Asp
>WENV183553245
OOBK01001521
285556
Bacillota
TGT
Thr
>WENV183553257
OOBK01001558
5692
Bacillota
GCT
Ser
>WENV183553256
OOBK01001558
56074
Bacillota
TGA
Ser
>WENV183553264
OOBK01001616
73009
Bacillota
CAG
Leu
>WENV183553275
OOBK01001727
398857
Bacillota
TTC
Glu
>WENV183553280
OOBK01001751
480324
Bacillota
TTG
Gln
>WENV183553287
OOBK01001856
405363
Bacillota
GCA
Cys
>WENV183553289
OOBK01001898
398833
Bacillota
TGT
Thr
>WENV183553295
OOBK01001957
179755
Bacillota
CCG
Arg
>WENV183553299
OOBK01001980
175842
Bacillota
CAC
Val
>WENV183553301
OOBK01001990
280444
Bacillota
GGT
Thr
>WENV183553312
OOBK01002105
280473
Bacillota
TGG
Pro
>WENV183553318
OOBK01002178
280473
Bacillota
TGG
Pro
>WENV183553324
OOBK01002267
175859
Bacillota
TCT
Arg
>WENV183553329
OOBK01002354
398852
Bacillota
CTC
Glu
>WENV183553332
OOBK01002438
179242
Bacillota
TCT
Arg
>WENV183553333
OOBK01002457
280447
Bacillota
GAC
Val
>WENV183553341
OOBK01002610
480324
Bacillota
TTG
Gln
>WENV183553348
OOBK01002792
280444
Bacillota
GGT
Thr
>WENV183553352
OOBK01002955
280447
Bacillota
GAC
Val
>WENV183553367
OOBK01003169
46835
Bacillota
TAA
Leu
>WENV183553380
OOBK01003401
179755
Bacillota
CCG
Arg
>WENV183553383
OOBK01003588
280473
Bacillota
TGG
Pro
>WENV183553392
OOBK01003799
27216
Bacillota
GCT
Ser
>WENV183553402
OOBK01004045
400963
Bacillota
GTT
Asn
>WENV183553416
OOBK01004149
480520
Bacillota
TCC
Gly
>WENV183553409
OOBK01004149
480359
Bacillota
TCC
Gly
>WENV183553410
OOBK01004149
298270
Bacillota
TAC
Val
>WENV183553405
OOBK01004149
280646
Bacillota
TGC
Ala
>WENV183553419
OOBK01004149
330433
Bacillota
GTG
His
>WENV183553417
OOBK01004149
203851
Bacillota
TCT
Arg
>WENV183553414
OOBK01004149
141617
Bacillota
TAG
Leu
>WENV183553408
OOBK01004149
443965
Bacillota
>WENV183553421
OOBK01004190
179755
Bacillota
CCG
Arg
>WENV183553440
OOBK01004492
291581
Bacillota
CGG
Pro
>WENV183553439
OOBK01004492
480322
Bacillota
CTG
Gln
>WENV183553443
OOBK01004573
48505
Bacillota
TGA
Ser
>WENV183553446
OOBK01004699
20932
Bacillota
GCT
Ser
>WENV183553451
OOBK01004865
179166
Bacillota
TCT
Arg
>WENV183553466
OOBK01005424
20943
Bacillota
CGA
Ser
>WENV183553478
OOBK01006583
398835
Bacillota
GCC
Gly
>WENV183553505
OOBK01007818
200563
Bacillota
TGG
Pro
>WENV183553499
OOBK01007818
280642
Bacillota
TTG
Gln
>WENV183553500
OOBK01007818
280639
Bacillota
TTT
Lys
>WENV183553503
OOBK01007818
176018
Bacillota
CAT
Met
>WENV183553498
OOBK01007818
176014
Bacillota
TCT
Arg
>WENV183553509
OOBK01008144
287280
Bacillota
TGT
Thr
>WENV183553513
OOBK01008302
234991
Bacillota
GAT
Ile
>WENV183553514
OOBK01008302
291650
Bacillota
TGC
Ala
>WENV183553534
OOBK01009601
480324
Bacillota
TTG
Gln
>WENV183553539
OOBK01009868
296855
Bacillota
GGT
Thr
>WENV183553536
OOBK01009868
289713
Bacillota
TGT
Thr
>WENV183553569
OOBK01013518
398835
Bacillota
GCC
Gly
>WENV183553572
OOBK01013910
298260
Bacillota
GTT
Asn
>WENV183553580
OOBK01014091
56079
Bacillota
AAG
Leu
>WENV183553605
OOBK01019044
73638
Bacillota
AAG
Leu
>WENV183553626
OOBK01022383
184497
Bacillota
GGG
Pro
>WENV183553658
OOBK01032105
484885
Bacillota
TCC
Gly
>WENV183553672
OOBK01038642
481217
Bacillota
GCA
Cys
>WENV183553677
OOBK01041571
184537
Bacillota
ACG
Arg
>WENV183553674
OOBK01041571
186123
Bacillota
GTC
Asp
>WENV183553675
OOBK01041571
405393
Bacillota
GCC
Gly
>WENV183553688
OOBK01046108
280547
Bacillota
GTC
Asp
>WENV183553693
OOBK01047839
480337
Bacillota
TCC
Gly
>WENV183553692
OOBK01047839
208539
Bacillota
TGG
Pro
>WENV183553699
OOBK01051451
332181
Bacillota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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