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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170443739
CEUX01008099
183378
Bacteroidota
GGC
Ala
>WENV170443958
CEUX01036252
183480
Bacteroidota
TGC
Ala
>WENV170444040
CEUX01047566
299065
Bacteroidota
TTG
Gln
>WENV170444089
CEUX01052226
155808
Bacteroidota
TGG
Pro
>WENV170444198
CEUX01069504
57660
Bacteroidota
TGA
Ser
>WENV170444269
CEUX01081116
399898
Bacteroidota
GGT
Thr
>WENV170444275
CEUX01081859
193675
Bacteroidota
CAT
Met
>WENV170444303
CEUX01087057
187628
Bacteroidota
TCT
Arg
>WENV170444349
CEUX01094947
183856
Bacteroidota
CAT
Met
>WENV170444374
CEUX01099267
117928
Bacteroidota
GTA
Tyr
>WENV170444488
CEUX01110297
118418
Bacteroidota
TAG
Leu
>WENV170444531
CEUX01139269
400818
Bacteroidota
TTC
Glu
>WENV170444553
CEUX01147835
193718
Bacteroidota
GTC
Asp
>WENV170444703
CEUX01206797
285586
Bacteroidota
GCC
Gly
>WENV170444706
CEUX01207777
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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