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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170552486
CXWK01000156
233847
Bacteroidota
TGC
Ala
>WENV170553632
CXWK01025961
361792
Bacteroidota
GAA
Phe
>WENV170553733
CXWK01028850
282910
Bacteroidota
TTT
Lys
>WENV170554052
CXWK01044727
195531
Bacteroidota
GTC
Asp
>WENV170554374
CXWK01065420
441920
Bacteroidota
TTC
Glu
>WENV170554494
CXWK01073194
179817
Bacteroidota
GGC
Ala
>WENV170554563
CXWK01078837
281130
Bacteroidota
GAA
Phe
>WENV170554725
CXWK01087272
165648
Bacteroidota
TAC
Val
>WENV170555142
CXWK01096614
283107
Bacteroidota
GCC
Gly
>WENV170555143
CXWK01096614
46780
Bacteroidota
TAA
Leu
>WENV170555170
CXWK01097162
200370
Bacteroidota
CAT
Met
>WENV170555211
CXWK01098521
156756
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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