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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183591263
OOCY01000002
143169
Bacteroidota
GGG
Pro
>WENV183591264
OOCY01000002
425638
Bacteroidota
CTG
Gln
>WENV183591290
OOCY01000018
338125
Bacteroidota
CCT
Arg
>WENV183591329
OOCY01000038
126966
Bacteroidota
TAC
Val
>WENV183591330
OOCY01000038
126966
Bacteroidota
TAC
Val
>WENV183591338
OOCY01000041
235207
Bacteroidota
CAT
Met
>WENV183591339
OOCY01000041
235207
Bacteroidota
CAT
Met
>WENV183591351
OOCY01000049
56823
Bacteroidota
TGA
Ser
>WENV183591384
OOCY01000074
126965
Bacteroidota
GGG
Pro
>WENV183591426
OOCY01000112
301449
Bacteroidota
CGG
Pro
>WENV183591436
OOCY01000133
301449
Bacteroidota
CGG
Pro
>WENV183591444
OOCY01000138
113604
Bacteroidota
>WENV183591446
OOCY01000138
56823
Bacteroidota
TGA
Ser
>WENV183591451
OOCY01000145
94703
Bacteroidota
GTA
Tyr
>WENV183591457
OOCY01000162
338124
Bacteroidota
CCG
Arg
>WENV183591466
OOCY01000165
80607
Bacteroidota
GTA
Tyr
>WENV183591489
OOCY01000174
94703
Bacteroidota
GTA
Tyr
>WENV183591557
OOCY01000247
16220
Bacteroidota
GGA
Ser
>WENV183591558
OOCY01000247
143169
Bacteroidota
GGG
Pro
>WENV183591582
OOCY01000282
94703
Bacteroidota
GTA
Tyr
>WENV183591589
OOCY01000302
44852
Bacteroidota
TAA
Leu
>WENV183591590
OOCY01000304
235102
Bacteroidota
CGT
Thr
>WENV183591599
OOCY01000317
143169
Bacteroidota
GGG
Pro
>WENV183591670
OOCY01000452
113604
Bacteroidota
>WENV183591677
OOCY01000480
338132
Bacteroidota
GCA
Cys
>WENV183591678
OOCY01000480
338132
Bacteroidota
GCA
Cys
>WENV183591711
OOCY01000607
80607
Bacteroidota
GTA
Tyr
>WENV183591712
OOCY01000607
144590
Bacteroidota
GTT
Asn
>WENV183591713
OOCY01000607
144590
Bacteroidota
GTT
Asn
>WENV183591719
OOCY01000619
155123
Bacteroidota
GTT
Asn
>WENV183591720
OOCY01000619
155123
Bacteroidota
GTT
Asn
>WENV183591736
OOCY01000670
235207
Bacteroidota
CAT
Met
>WENV183591741
OOCY01000685
95559
Bacteroidota
TAG
Leu
>WENV183591744
OOCY01000695
94703
Bacteroidota
GTA
Tyr
>WENV183591745
OOCY01000695
94703
Bacteroidota
GTA
Tyr
>WENV183591754
OOCY01000737
436206
Bacteroidota
TTG
Gln
>WENV183591758
OOCY01000750
338132
Bacteroidota
GCA
Cys
>WENV183591764
OOCY01000768
56823
Bacteroidota
TGA
Ser
>WENV183591765
OOCY01000777
144590
Bacteroidota
GTT
Asn
>WENV183591784
OOCY01000897
144655
Bacteroidota
GGC
Ala
>WENV183591794
OOCY01000992
16224
Bacteroidota
GGA
Ser
>WENV183591842
OOCY01001313
338132
Bacteroidota
GCA
Cys
>WENV183591856
OOCY01001419
16224
Bacteroidota
GGA
Ser
>WENV183591864
OOCY01001458
235097
Bacteroidota
TTT
Lys
>WENV183591897
OOCY01001686
94703
Bacteroidota
GTA
Tyr
>WENV183591904
OOCY01001744
24174
Bacteroidota
GCT
Ser
>WENV183591923
OOCY01002159
150485
Bacteroidota
GTT
Asn
>WENV183591924
OOCY01002159
150485
Bacteroidota
GTT
Asn
>WENV183591925
OOCY01002159
150485
Bacteroidota
GTT
Asn
>WENV183591931
OOCY01002310
144655
Bacteroidota
GGC
Ala
>WENV183591938
OOCY01002530
193809
Bacteroidota
CAT
Met
>WENV183591949
OOCY01002666
56823
Bacteroidota
TGA
Ser
>WENV183591979
OOCY01003405
144656
Bacteroidota
GTG
His
>WENV183591998
OOCY01004458
95875
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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