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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183595656
OODD01000201
235102
Bacteroidota
CGT
Thr
>WENV183595782
OODD01000661
146761
Bacteroidota
GAT
Ile
>WENV183595501
OODD01000005
126965
Bacteroidota
GGG
Pro
>WENV183595556
OODD01000040
343138
Bacteroidota
CCT
Arg
>WENV183595574
OODD01000057
24174
Bacteroidota
GCT
Ser
>WENV183595557
OODD01000043
436206
Bacteroidota
TTG
Gln
>WENV183595704
OODD01000286
436206
Bacteroidota
TTG
Gln
>WENV183595527
OODD01000017
155123
Bacteroidota
GTT
Asn
>WENV183595526
OODD01000017
155123
Bacteroidota
GTT
Asn
>WENV183595525
OODD01000017
155123
Bacteroidota
GTT
Asn
>WENV183595791
OODD01000719
338124
Bacteroidota
CCG
Arg
>WENV183595994
OODD01004304
126641
Bacteroidota
TAC
Val
>WENV183595818
OODD01000954
338132
Bacteroidota
GCA
Cys
>WENV183595794
OODD01000736
338132
Bacteroidota
GCA
Cys
>WENV183595496
OODD01000002
338132
Bacteroidota
GCA
Cys
>WENV183595495
OODD01000002
338132
Bacteroidota
GCA
Cys
>WENV183595785
OODD01000671
301449
Bacteroidota
CGG
Pro
>WENV183595515
OODD01000010
136207
Bacteroidota
TAC
Val
>WENV183595514
OODD01000010
136207
Bacteroidota
TAC
Val
>WENV183595675
OODD01000236
144656
Bacteroidota
GTG
His
>WENV183595646
OODD01000190
235207
Bacteroidota
CAT
Met
>WENV183595645
OODD01000190
235207
Bacteroidota
CAT
Met
>WENV183595743
OODD01000491
143169
Bacteroidota
GGG
Pro
>WENV183595615
OODD01000135
143169
Bacteroidota
GGG
Pro
>WENV183595980
OODD01003656
80607
Bacteroidota
GTA
Tyr
>WENV183596120
OODD01023578
113604
Bacteroidota
>WENV183595852
OODD01001325
16999
Bacteroidota
GGA
Ser
>WENV183595859
OODD01001404
144590
Bacteroidota
GTT
Asn
>WENV183595858
OODD01001404
144590
Bacteroidota
GTT
Asn
>WENV183595884
OODD01001684
95559
Bacteroidota
TAG
Leu
>WENV183595773
OODD01000623
144655
Bacteroidota
GGC
Ala
>WENV183595619
OODD01000142
44852
Bacteroidota
TAA
Leu
>WENV183595572
OODD01000054
150485
Bacteroidota
GTT
Asn
>WENV183595571
OODD01000054
150485
Bacteroidota
GTT
Asn
>WENV183595570
OODD01000054
150485
Bacteroidota
GTT
Asn
>WENV183595490
OODD01000001
425638
Bacteroidota
CTG
Gln
>WENV183595834
OODD01001181
56823
Bacteroidota
TGA
Ser
>WENV183595821
OODD01000965
56823
Bacteroidota
TGA
Ser
>WENV183595769
OODD01000618
56823
Bacteroidota
TGA
Ser
>WENV183595664
OODD01000221
56823
Bacteroidota
TGA
Ser
>WENV183595494
OODD01000002
56823
Bacteroidota
TGA
Ser
>WENV183595878
OODD01001612
16224
Bacteroidota
GGA
Ser
>WENV183595801
OODD01000819
16224
Bacteroidota
GGA
Ser
>WENV183595797
OODD01000752
16220
Bacteroidota
GGA
Ser
>WENV183595740
OODD01000452
338125
Bacteroidota
CCT
Arg
>WENV183596050
OODD01008644
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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