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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183599178
OODH01000001
150485
Bacteroidota
GTT
Asn
>WENV183599210
OODH01000021
80835
Bacteroidota
GTA
Tyr
>WENV183599211
OODH01000021
80835
Bacteroidota
GTA
Tyr
>WENV183599236
OODH01000047
338125
Bacteroidota
CCT
Arg
>WENV183599237
OODH01000047
149691
Bacteroidota
GTT
Asn
>WENV183599254
OODH01000066
16224
Bacteroidota
GGA
Ser
>WENV183599269
OODH01000093
338132
Bacteroidota
GCA
Cys
>WENV183599270
OODH01000096
415410
Bacteroidota
TTG
Gln
>WENV183599279
OODH01000119
144590
Bacteroidota
GTT
Asn
>WENV183599296
OODH01000151
144933
Bacteroidota
TCT
Arg
>WENV183599316
OODH01000204
414426
Bacteroidota
CTG
Gln
>WENV183599320
OODH01000219
146800
Bacteroidota
>WENV183599321
OODH01000222
338124
Bacteroidota
CCG
Arg
>WENV183599327
OODH01000243
44852
Bacteroidota
TAA
Leu
>WENV183599328
OODH01000253
80607
Bacteroidota
GTA
Tyr
>WENV183599331
OODH01000260
415410
Bacteroidota
TTG
Gln
>WENV183599341
OODH01000287
80835
Bacteroidota
GTA
Tyr
>WENV183599350
OODH01000307
338132
Bacteroidota
GCA
Cys
>WENV183599358
OODH01000340
338124
Bacteroidota
CCG
Arg
>WENV183599378
OODH01000412
80835
Bacteroidota
GTA
Tyr
>WENV183599390
OODH01000452
80607
Bacteroidota
GTA
Tyr
>WENV183599392
OODH01000469
16224
Bacteroidota
GGA
Ser
>WENV183599428
OODH01000594
235207
Bacteroidota
CAT
Met
>WENV183599469
OODH01000851
235165
Bacteroidota
CCA
Trp
>WENV183599473
OODH01000864
144656
Bacteroidota
GTG
His
>WENV183599496
OODH01001066
80607
Bacteroidota
GTA
Tyr
>WENV183599500
OODH01001102
338125
Bacteroidota
CCT
Arg
>WENV183599501
OODH01001121
342206
Bacteroidota
TTC
Glu
>WENV183599541
OODH01001499
338132
Bacteroidota
GCA
Cys
>WENV183599559
OODH01001649
144590
Bacteroidota
GTT
Asn
>WENV183599568
OODH01001827
150485
Bacteroidota
GTT
Asn
>WENV183599575
OODH01001917
144659
Bacteroidota
GTG
His
>WENV183599580
OODH01002019
154643
Bacteroidota
CAT
Met
>WENV183599590
OODH01002182
235129
Bacteroidota
GCC
Gly
>WENV183599607
OODH01002455
341950
Bacteroidota
>WENV183599611
OODH01002483
149691
Bacteroidota
GTT
Asn
>WENV183599634
OODH01002903
338486
Bacteroidota
CAT
Met
>WENV183599636
OODH01002936
95875
Bacteroidota
TAG
Leu
>WENV183599638
OODH01002972
126641
Bacteroidota
TAC
Val
>WENV183599648
OODH01003095
144639
Bacteroidota
GGC
Ala
>WENV183599649
OODH01003114
149691
Bacteroidota
GTT
Asn
>WENV183599654
OODH01003254
23696
Bacteroidota
GCT
Ser
>WENV183599655
OODH01003254
338155
Bacteroidota
CTC
Glu
>WENV183599667
OODH01003409
243025
Bacteroidota
CAT
Met
>WENV183599671
OODH01003518
80607
Bacteroidota
GTA
Tyr
>WENV183599676
OODH01003581
46165
Bacteroidota
TGA
Ser
>WENV183599677
OODH01003675
150485
Bacteroidota
GTT
Asn
>WENV183599678
OODH01003698
58715
Bacteroidota
GAG
Leu
>WENV183599689
OODH01004038
149691
Bacteroidota
GTT
Asn
>WENV183599698
OODH01004189
145504
Bacteroidota
TGT
Thr
>WENV183599711
OODH01004576
238121
Bacteroidota
CTT
Lys
>WENV183599725
OODH01005148
80835
Bacteroidota
GTA
Tyr
>WENV183599734
OODH01005418
80835
Bacteroidota
GTA
Tyr
>WENV183599759
OODH01007004
147439
Bacteroidota
TCT
Arg
>WENV183599774
OODH01007581
235129
Bacteroidota
GCC
Gly
>WENV183599775
OODH01007581
59689
Bacteroidota
CAG
Leu
>WENV183599797
OODH01009042
58714
Bacteroidota
CAA
Leu
>WENV183599833
OODH01012329
235102
Bacteroidota
CGT
Thr
>WENV183599841
OODH01013431
411550
Bacteroidota
CTG
Gln
>WENV183599846
OODH01013772
344692
Bacteroidota
GGT
Thr
>WENV183599861
OODH01015455
151121
Bacteroidota
CAT
Met
>WENV183599888
OODH01018341
144659
Bacteroidota
GTG
His
>WENV183599987
OODH01033405
338164
Bacteroidota
TTC
Glu
>WENV183600005
OODH01037405
239647
Bacteroidota
TTT
Lys
>WENV183600040
OODH01044038
95618
Bacteroidota
TAG
Leu
>WENV183600042
OODH01046361
144933
Bacteroidota
TCT
Arg
>WENV183600050
OODH01051680
147439
Bacteroidota
TCT
Arg
>WENV183600051
OODH01052731
343138
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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