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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183606527
OODN01012331
235097
Bacteroidota
TTT
Lys
>WENV183605793
OODN01000030
235102
Bacteroidota
CGT
Thr
>WENV183605902
OODN01000096
436206
Bacteroidota
TTG
Gln
>WENV183605794
OODN01000031
338124
Bacteroidota
CCG
Arg
>WENV183606085
OODN01000406
338132
Bacteroidota
GCA
Cys
>WENV183606002
OODN01000240
193809
Bacteroidota
CAT
Met
>WENV183606044
OODN01000312
301449
Bacteroidota
CGG
Pro
>WENV183605923
OODN01000126
144656
Bacteroidota
GTG
His
>WENV183606049
OODN01000326
235207
Bacteroidota
CAT
Met
>WENV183605995
OODN01000226
80607
Bacteroidota
GTA
Tyr
>WENV183605967
OODN01000165
80607
Bacteroidota
GTA
Tyr
>WENV183606118
OODN01000527
113604
Bacteroidota
>WENV183606149
OODN01000686
52358
Bacteroidota
TGA
Ser
>WENV183605829
OODN01000050
52358
Bacteroidota
TGA
Ser
>WENV183605965
OODN01000165
144590
Bacteroidota
GTT
Asn
>WENV183605964
OODN01000165
144590
Bacteroidota
GTT
Asn
>WENV183606095
OODN01000458
95559
Bacteroidota
TAG
Leu
>WENV183605726
OODN01000008
419272
Bacteroidota
CTG
Gln
>WENV183605784
OODN01000026
144655
Bacteroidota
GGC
Ala
>WENV183605728
OODN01000008
139743
Bacteroidota
GGG
Pro
>WENV183605812
OODN01000042
44852
Bacteroidota
TAA
Leu
>WENV183605924
OODN01000126
16224
Bacteroidota
GGA
Ser
>WENV183605727
OODN01000008
16220
Bacteroidota
GGA
Ser
>WENV183605810
OODN01000042
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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