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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183619985
OOFR01001642
238765
Bacteroidota
GCC
Gly
>WENV183620394
OOFR01048148
126691
Bacteroidota
TGG
Pro
>WENV183620071
OOFR01004145
180185
Bacteroidota
TGC
Ala
>WENV183620330
OOFR01032306
81938
Bacteroidota
GAG
Leu
>WENV183620022
OOFR01002371
127458
Bacteroidota
GAC
Val
>WENV183620262
OOFR01019542
338568
Bacteroidota
TTC
Glu
>WENV183620460
OOFR01065395
369129
Bacteroidota
TTC
Glu
>WENV183620098
OOFR01005699
45519
Bacteroidota
GGA
Ser
>WENV183620329
OOFR01032306
235936
Bacteroidota
TTT
Lys
>WENV183620437
OOFR01060003
127288
Bacteroidota
TGG
Pro
>WENV183620423
OOFR01055963
238764
Bacteroidota
>WENV183620273
OOFR01020291
238764
Bacteroidota
>WENV183620116
OOFR01007237
290994
Bacteroidota
CAT
Met
>WENV183620238
OOFR01017269
145512
Bacteroidota
CAT
Met
>WENV183620438
OOFR01060003
176463
Bacteroidota
TCT
Arg
>WENV183620417
OOFR01054084
176463
Bacteroidota
TCT
Arg
>WENV183620286
OOFR01023079
145408
Bacteroidota
TCT
Arg
>WENV183620007
OOFR01002158
145555
Bacteroidota
GTC
Asp
>WENV183620105
OOFR01006113
341465
Bacteroidota
TTC
Glu
>WENV183620458
OOFR01064980
347866
Bacteroidota
TTC
Glu
>WENV183620407
OOFR01052261
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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