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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183630799
OOGU01002776
17496
Bacteroidota
GGA
Ser
>WENV183630839
OOGU01004234
280660
Bacteroidota
CCA
Trp
>WENV183630916
OOGU01008748
126712
Bacteroidota
GAC
Val
>WENV183631101
OOGU01031320
145271
Bacteroidota
CAT
Met
>WENV183631136
OOGU01039532
238765
Bacteroidota
GCC
Gly
>WENV183631139
OOGU01039974
340230
Bacteroidota
CCT
Arg
>WENV183631140
OOGU01040003
145555
Bacteroidota
GTC
Asp
>WENV183631154
OOGU01042269
146800
Bacteroidota
>WENV183631229
OOGU01055398
150454
Bacteroidota
TGT
Thr
>WENV183631230
OOGU01055398
101289
Bacteroidota
GTA
Tyr
>WENV183631266
OOGU01065594
360629
Bacteroidota
GGT
Thr
>WENV183631348
OOGU01085861
341598
Bacteroidota
GCC
Gly
>WENV183631394
OOGU01098821
127288
Bacteroidota
TGG
Pro
>WENV183631446
OOGU01116306
145555
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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