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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183661867
ORJL010142322
281518
Betaproteobacteria
CAT
Met
>WENV183662056
ORJL010161124
212101
Betaproteobacteria
GAT
Ile
>WENV183660325
ORJL010015069
283940
Betaproteobacteria
TTC
Glu
>WENV183661892
ORJL010146443
283940
Betaproteobacteria
TTC
Glu
>WENV183662230
ORJL010174159
283940
Betaproteobacteria
TTC
Glu
>WENV183663985
ORJL010334828
283940
Betaproteobacteria
TTC
Glu
>WENV183664098
ORJL010343595
283940
Betaproteobacteria
TTC
Glu
>WENV183664850
ORJL010416128
283940
Betaproteobacteria
TTC
Glu
>WENV183669103
ORJL010809088
283940
Betaproteobacteria
TTC
Glu
>WENV183670263
ORJL010927602
283940
Betaproteobacteria
TTC
Glu
>WENV183673887
ORJL011330115
283940
Betaproteobacteria
TTC
Glu
>WENV183674724
ORJL011424872
283940
Betaproteobacteria
TTC
Glu
>WENV183676201
ORJL011597744
283940
Betaproteobacteria
TTC
Glu
>WENV183678346
ORJL011865819
283940
Betaproteobacteria
TTC
Glu
>WENV183678504
ORJL011885639
284938
Betaproteobacteria
TTT
Lys
>WENV183665223
ORJL010450639
188716
Betaproteobacteria
ACG
Arg
>WENV183675115
ORJL011473833
281524
Betaproteobacteria
GAA
Phe
>WENV183675272
ORJL011489605
281524
Betaproteobacteria
GAA
Phe
>WENV183676824
ORJL011672984
400814
Betaproteobacteria
CAC
Val
>WENV183665442
ORJL010463536
176193
Betaproteobacteria
TTG
Gln
>WENV183661908
ORJL010147640
282862
Betaproteobacteria
TGC
Ala
>WENV183663545
ORJL010292865
281431
Betaproteobacteria
GTT
Asn
>WENV183662949
ORJL010240533
345422
Betaproteobacteria
TTT
Lys
>WENV183663132
ORJL010256676
345422
Betaproteobacteria
TTT
Lys
>WENV183664582
ORJL010390939
345422
Betaproteobacteria
TTT
Lys
>WENV183668848
ORJL010779874
345422
Betaproteobacteria
TTT
Lys
>WENV183673667
ORJL011304493
345422
Betaproteobacteria
TTT
Lys
>WENV183674657
ORJL011416071
345422
Betaproteobacteria
TTT
Lys
>WENV183674734
ORJL011426250
345422
Betaproteobacteria
TTT
Lys
>WENV183674756
ORJL011428439
345422
Betaproteobacteria
TTT
Lys
>WENV183677594
ORJL011775041
345422
Betaproteobacteria
TTT
Lys
>WENV183678057
ORJL011832753
345422
Betaproteobacteria
TTT
Lys
>WENV183678434
ORJL011879037
345422
Betaproteobacteria
TTT
Lys
>WENV183676424
ORJL011622607
185257
Betaproteobacteria
CAT
Met
>WENV183678836
ORJL011930079
192191
Betaproteobacteria
CAT
Met
>WENV183670010
ORJL010899034
192191
Betaproteobacteria
CAT
Met
>WENV183672439
ORJL011170109
192191
Betaproteobacteria
CAT
Met
>WENV183674588
ORJL011407129
111196
Betaproteobacteria
GTA
Tyr
>WENV183667560
ORJL010659959
483989
Betaproteobacteria
>WENV183676145
ORJL011591809
282942
Betaproteobacteria
CCG
Arg
>WENV183676341
ORJL011612246
283942
Betaproteobacteria
CCA
Trp
>WENV183673501
ORJL011282699
180114
Betaproteobacteria
CAT
Met
>WENV183677158
ORJL011717866
180114
Betaproteobacteria
CAT
Met
>WENV183678298
ORJL011859666
180114
Betaproteobacteria
CAT
Met
>WENV183663476
ORJL010287928
342564
Betaproteobacteria
CGC
Ala
>WENV183668440
ORJL010739646
368643
Betaproteobacteria
GCC
Gly
>WENV183673137
ORJL011246345
178982
Betaproteobacteria
TTG
Gln
>WENV183666938
ORJL010598183
225043
Betaproteobacteria
ACG
Arg
>WENV183678003
ORJL011824419
225043
Betaproteobacteria
ACG
Arg
>WENV183664767
ORJL010407485
180232
Betaproteobacteria
TTG
Gln
>WENV183662316
ORJL010180318
195882
Betaproteobacteria
TTG
Gln
>WENV183661092
ORJL010080388
187036
Betaproteobacteria
CAT
Met
>WENV183672517
ORJL011177257
20603
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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