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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183691354
ORMF011747688
239991
Betaproteobacteria
TGG
Pro
>WENV183693643
ORMF012114481
239991
Betaproteobacteria
TGG
Pro
>WENV183687381
ORMF011138728
31263
Betaproteobacteria
CGA
Ser
>WENV183691744
ORMF011810746
212101
Betaproteobacteria
GAT
Ile
>WENV183680080
ORMF010135925
283940
Betaproteobacteria
TTC
Glu
>WENV183686172
ORMF010960235
283940
Betaproteobacteria
TTC
Glu
>WENV183686664
ORMF011035340
283940
Betaproteobacteria
TTC
Glu
>WENV183691313
ORMF011739424
283940
Betaproteobacteria
TTC
Glu
>WENV183693751
ORMF012130674
283940
Betaproteobacteria
TTC
Glu
>WENV183693754
ORMF012130807
283940
Betaproteobacteria
TTC
Glu
>WENV183681527
ORMF010321020
284938
Betaproteobacteria
TTT
Lys
>WENV183694999
ORMF012317113
284938
Betaproteobacteria
TTT
Lys
>WENV183685806
ORMF010903370
188716
Betaproteobacteria
ACG
Arg
>WENV183686971
ORMF011076616
494612
Betaproteobacteria
GCA
Cys
>WENV183679328
ORMF010047949
197278
Betaproteobacteria
CAT
Met
>WENV183693315
ORMF012061002
180105
Betaproteobacteria
CGG
Pro
>WENV183690996
ORMF011683030
303331
Betaproteobacteria
GCC
Gly
>WENV183693644
ORMF012114481
176850
Betaproteobacteria
TCT
Arg
>WENV183680430
ORMF010180884
281524
Betaproteobacteria
GAA
Phe
>WENV183693612
ORMF012109657
281524
Betaproteobacteria
GAA
Phe
>WENV183695560
ORMF012409418
178141
Betaproteobacteria
CAT
Met
>WENV183679362
ORMF010051885
381006
Betaproteobacteria
GTT
Asn
>WENV183681593
ORMF010332909
381006
Betaproteobacteria
GTT
Asn
>WENV183683704
ORMF010609826
381006
Betaproteobacteria
GTT
Asn
>WENV183684693
ORMF010744096
381006
Betaproteobacteria
GTT
Asn
>WENV183689093
ORMF011388780
381006
Betaproteobacteria
GTT
Asn
>WENV183689816
ORMF011496562
381006
Betaproteobacteria
GTT
Asn
>WENV183689818
ORMF011496840
381006
Betaproteobacteria
GTT
Asn
>WENV183693625
ORMF012112250
381006
Betaproteobacteria
GTT
Asn
>WENV183696282
ORMF012532546
381006
Betaproteobacteria
GTT
Asn
>WENV183696606
ORMF012583422
381006
Betaproteobacteria
GTT
Asn
>WENV183684568
ORMF010724352
281431
Betaproteobacteria
GTT
Asn
>WENV183689169
ORMF011399273
281431
Betaproteobacteria
GTT
Asn
>WENV183681722
ORMF010350107
345422
Betaproteobacteria
TTT
Lys
>WENV183683881
ORMF010632864
345422
Betaproteobacteria
TTT
Lys
>WENV183685922
ORMF010922549
345422
Betaproteobacteria
TTT
Lys
>WENV183687171
ORMF011106507
429429
Betaproteobacteria
CAC
Val
>WENV183680902
ORMF010237408
192191
Betaproteobacteria
CAT
Met
>WENV183687203
ORMF011111961
192191
Betaproteobacteria
CAT
Met
>WENV183679202
ORMF010028620
95740
Betaproteobacteria
GTA
Tyr
>WENV183681693
ORMF010345473
290703
Betaproteobacteria
GAA
Phe
>WENV183681136
ORMF010267563
350355
Betaproteobacteria
TTC
Glu
>WENV183688572
ORMF011309942
350355
Betaproteobacteria
TTC
Glu
>WENV183695308
ORMF012370808
350355
Betaproteobacteria
TTC
Glu
>WENV183681186
ORMF010273350
180114
Betaproteobacteria
CAT
Met
>WENV183684111
ORMF010663794
180232
Betaproteobacteria
TTG
Gln
>WENV183679286
ORMF010040453
180232
Betaproteobacteria
TTG
Gln
>WENV183694961
ORMF012311771
195882
Betaproteobacteria
TTG
Gln
>WENV183680904
ORMF010237408
195882
Betaproteobacteria
TTG
Gln
>WENV183692188
ORMF011876613
496730
Betaproteobacteria
GCA
Cys
>WENV183681364
ORMF010296200
187036
Betaproteobacteria
CAT
Met
>WENV183688534
ORMF011302930
299618
Betaproteobacteria
CGT
Thr
>WENV183693194
ORMF012040504
235013
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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