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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183726531
PJTO01000003
357205
Betaproteobacteria
GGC
Ala
>WENV183726533
PJTO01000003
357205
Betaproteobacteria
GGC
Ala
>WENV183726559
PJTO01000011
300516
Betaproteobacteria
TTT
Lys
>WENV183726560
PJTO01000011
401202
Betaproteobacteria
CCT
Arg
>WENV183726636
PJTO01000044
300516
Betaproteobacteria
TTT
Lys
>WENV183726637
PJTO01000044
300516
Betaproteobacteria
TTT
Lys
>WENV183726656
PJTO01000051
194596
Betaproteobacteria
TCT
Arg
>WENV183726676
PJTO01000064
117806
Betaproteobacteria
GTA
Tyr
>WENV183726675
PJTO01000064
292271
Betaproteobacteria
TGT
Thr
>WENV183726677
PJTO01000064
283554
Betaproteobacteria
TCC
Gly
>WENV183726689
PJTO01000068
178141
Betaproteobacteria
CAT
Met
>WENV183726690
PJTO01000068
178141
Betaproteobacteria
CAT
Met
>WENV183726789
PJTO01000174
176193
Betaproteobacteria
TTG
Gln
>WENV183726883
PJTO01000354
239991
Betaproteobacteria
TGG
Pro
>WENV183726895
PJTO01000400
177009
Betaproteobacteria
GGG
Pro
>WENV183727009
PJTO01001717
212101
Betaproteobacteria
GAT
Ile
>WENV183727195
PJTO01011732
283937
Betaproteobacteria
GCC
Gly
>WENV183727234
PJTO01016543
11470
Betaproteobacteria
GCT
Ser
>WENV183727259
PJTO01018485
357205
Betaproteobacteria
GGC
Ala
>WENV183727262
PJTO01018485
357205
Betaproteobacteria
GGC
Ala
>WENV183727295
PJTO01023927
29780
Betaproteobacteria
TGA
Ser
>WENV183727320
PJTO01027257
177009
Betaproteobacteria
GGG
Pro
>WENV183727327
PJTO01028630
283941
Betaproteobacteria
CTT
Lys
>WENV183727328
PJTO01028630
283941
Betaproteobacteria
CTT
Lys
>WENV183727363
PJTO01034408
180897
Betaproteobacteria
TCT
Arg
>WENV183727377
PJTO01038326
283940
Betaproteobacteria
TTC
Glu
>WENV183727386
PJTO01039618
305239
Betaproteobacteria
TTT
Lys
>WENV183727435
PJTO01055884
283940
Betaproteobacteria
TTC
Glu
>WENV183727436
PJTO01055884
283940
Betaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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