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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183728504
PJTQ01000090
178141
Betaproteobacteria
CAT
Met
>WENV183728505
PJTQ01000090
178141
Betaproteobacteria
CAT
Met
>WENV183728335
PJTQ01000019
401202
Betaproteobacteria
CCT
Arg
>WENV183729266
PJTQ01016201
212101
Betaproteobacteria
GAT
Ile
>WENV183729423
PJTQ01037793
8858
Betaproteobacteria
GCT
Ser
>WENV183729616
PJTQ01092056
177009
Betaproteobacteria
GGG
Pro
>WENV183729375
PJTQ01029989
301701
Betaproteobacteria
GTG
His
>WENV183729348
PJTQ01025714
283445
Betaproteobacteria
GTT
Asn
>WENV183728484
PJTQ01000073
194596
Betaproteobacteria
TCT
Arg
>WENV183729506
PJTQ01055354
178096
Betaproteobacteria
TCT
Arg
>WENV183729551
PJTQ01065732
60914
Betaproteobacteria
TGA
Ser
>WENV183729394
PJTQ01034180
176193
Betaproteobacteria
TTG
Gln
>WENV183729602
PJTQ01087070
300982
Betaproteobacteria
TTT
Lys
>WENV183728334
PJTQ01000019
300516
Betaproteobacteria
TTT
Lys
>WENV183728470
PJTQ01000064
300516
Betaproteobacteria
TTT
Lys
>WENV183728471
PJTQ01000064
300516
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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