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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183730716
PJTS01000389
8858
Betaproteobacteria
GCT
Ser
>WENV183730808
PJTS01000911
73415
Betaproteobacteria
GTA
Tyr
>WENV183730950
PJTS01002505
235235
Betaproteobacteria
>WENV183731106
PJTS01009527
282862
Betaproteobacteria
TGC
Ala
>WENV183731130
PJTS01011844
400244
Betaproteobacteria
CCT
Arg
>WENV183731136
PJTS01012233
283937
Betaproteobacteria
GCC
Gly
>WENV183731144
PJTS01013086
283940
Betaproteobacteria
TTC
Glu
>WENV183731147
PJTS01013292
177009
Betaproteobacteria
GGG
Pro
>WENV183731155
PJTS01013982
328657
Betaproteobacteria
TAC
Val
>WENV183731170
PJTS01015030
178934
Betaproteobacteria
CAT
Met
>WENV183731211
PJTS01019485
20385
Betaproteobacteria
GGA
Ser
>WENV183731233
PJTS01023876
282942
Betaproteobacteria
CCG
Arg
>WENV183731248
PJTS01026146
298213
Betaproteobacteria
TGT
Thr
>WENV183731259
PJTS01028584
127222
Betaproteobacteria
CAG
Leu
>WENV183731260
PJTS01028687
76492
Betaproteobacteria
TAA
Leu
>WENV183731298
PJTS01034387
127222
Betaproteobacteria
CAG
Leu
>WENV183731299
PJTS01034387
127222
Betaproteobacteria
CAG
Leu
>WENV183731305
PJTS01035208
406663
Betaproteobacteria
CAC
Val
>WENV183731321
PJTS01038181
20508
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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