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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183733556
PJTY01004659
178431
Betaproteobacteria
GAT
Ile
>WENV183733806
PJTY01029724
283192
Betaproteobacteria
TGT
Thr
>WENV183733695
PJTY01012043
494612
Betaproteobacteria
GCA
Cys
>WENV183733494
PJTY01002813
283937
Betaproteobacteria
GCC
Gly
>WENV183733495
PJTY01002813
283937
Betaproteobacteria
GCC
Gly
>WENV183733454
PJTY01002250
305239
Betaproteobacteria
TTT
Lys
>WENV183733632
PJTY01008107
73476
Betaproteobacteria
GTA
Tyr
>WENV183733745
PJTY01020373
178141
Betaproteobacteria
CAT
Met
>WENV183733391
PJTY01001557
300516
Betaproteobacteria
TTT
Lys
>WENV183733656
PJTY01009514
29693
Betaproteobacteria
TGA
Ser
>WENV183733473
PJTY01002594
282862
Betaproteobacteria
TGC
Ala
>WENV183733541
PJTY01004082
180897
Betaproteobacteria
TCT
Arg
>WENV183733539
PJTY01003982
2491
Betaproteobacteria
>WENV183733510
PJTY01003186
481019
Betaproteobacteria
CCC
Gly
>WENV183733417
PJTY01001817
118059
Betaproteobacteria
TAG
Leu
>WENV183733584
PJTY01005380
400347
Betaproteobacteria
CAC
Val
>WENV183733472
PJTY01002594
176778
Betaproteobacteria
GAT
Ile
>WENV183733372
PJTY01001400
499230
Betaproteobacteria
TCC
Gly
>WENV183733598
PJTY01005977
400381
Betaproteobacteria
CCT
Arg
>WENV183733475
PJTY01002625
400348
Betaproteobacteria
CCT
Arg
>WENV183733456
PJTY01002306
283191
Betaproteobacteria
CTT
Lys
>WENV183733517
PJTY01003321
335785
Betaproteobacteria
CCG
Arg
>WENV183733657
PJTY01009514
100143
Betaproteobacteria
TAA
Leu
>WENV183733377
PJTY01001427
399347
Betaproteobacteria
CAC
Val
>WENV183733519
PJTY01003373
5756
Betaproteobacteria
GCT
Ser
>WENV183733756
PJTY01022955
414048
Betaproteobacteria
GGT
Thr
>WENV183733551
PJTY01004385
29692
Betaproteobacteria
CGA
Ser
>WENV183733549
PJTY01004240
8602
Betaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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