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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734885
PJUA01000080
178141
Betaproteobacteria
CAT
Met
>WENV183734904
PJUA01000127
177009
Betaproteobacteria
GGG
Pro
>WENV183734937
PJUA01000191
183734
Betaproteobacteria
TCT
Arg
>WENV183734938
PJUA01000192
29780
Betaproteobacteria
TGA
Ser
>WENV183735001
PJUA01000368
76492
Betaproteobacteria
TAA
Leu
>WENV183735002
PJUA01000368
283937
Betaproteobacteria
GCC
Gly
>WENV183735003
PJUA01000368
480929
Betaproteobacteria
GCA
Cys
>WENV183735004
PJUA01000368
283937
Betaproteobacteria
GCC
Gly
>WENV183735005
PJUA01000368
283937
Betaproteobacteria
GCC
Gly
>WENV183735006
PJUA01000368
283937
Betaproteobacteria
GCC
Gly
>WENV183735025
PJUA01000410
118123
Betaproteobacteria
CAG
Leu
>WENV183735026
PJUA01000410
118123
Betaproteobacteria
CAG
Leu
>WENV183735032
PJUA01000459
283938
Betaproteobacteria
CGT
Thr
>WENV183735078
PJUA01000786
20508
Betaproteobacteria
GGA
Ser
>WENV183735083
PJUA01000809
5756
Betaproteobacteria
GCT
Ser
>WENV183735086
PJUA01000830
283941
Betaproteobacteria
CTT
Lys
>WENV183735087
PJUA01000830
283941
Betaproteobacteria
CTT
Lys
>WENV183735092
PJUA01000851
281681
Betaproteobacteria
TTT
Lys
>WENV183735112
PJUA01001032
118157
Betaproteobacteria
GAG
Leu
>WENV183735113
PJUA01001046
118123
Betaproteobacteria
CAG
Leu
>WENV183735125
PJUA01001167
178289
Betaproteobacteria
TTG
Gln
>WENV183735149
PJUA01001238
400244
Betaproteobacteria
CCT
Arg
>WENV183735186
PJUA01002109
283940
Betaproteobacteria
TTC
Glu
>WENV183735187
PJUA01002109
283940
Betaproteobacteria
TTC
Glu
>WENV183735192
PJUA01002273
20385
Betaproteobacteria
GGA
Ser
>WENV183735199
PJUA01002590
56355
Betaproteobacteria
TGA
Ser
>WENV183735209
PJUA01003097
189915
Betaproteobacteria
GAT
Ile
>WENV183735210
PJUA01003097
282862
Betaproteobacteria
TGC
Ala
>WENV183735219
PJUA01003858
284214
Betaproteobacteria
TAC
Val
>WENV183735239
PJUA01005059
298213
Betaproteobacteria
TGT
Thr
>WENV183735241
PJUA01005275
293769
Betaproteobacteria
GCC
Gly
>WENV183735242
PJUA01005410
480973
Betaproteobacteria
GCA
Cys
>WENV183735253
PJUA01005781
483989
Betaproteobacteria
>WENV183735291
PJUA01008587
283018
Betaproteobacteria
TTT
Lys
>WENV183735296
PJUA01009362
406663
Betaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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