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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183735568
PJUB01000050
483989
Betaproteobacteria
>WENV183735619
PJUB01000219
406663
Betaproteobacteria
CAC
Val
>WENV183735607
PJUB01000184
127222
Betaproteobacteria
CAG
Leu
>WENV183735608
PJUB01000184
127222
Betaproteobacteria
CAG
Leu
>WENV183735931
PJUB01012834
178141
Betaproteobacteria
CAT
Met
>WENV183735664
PJUB01000377
400244
Betaproteobacteria
CCT
Arg
>WENV183735816
PJUB01003710
283938
Betaproteobacteria
CGT
Thr
>WENV183735797
PJUB01002787
283941
Betaproteobacteria
CTT
Lys
>WENV183735798
PJUB01002787
283941
Betaproteobacteria
CTT
Lys
>WENV183735921
PJUB01011556
283941
Betaproteobacteria
CTT
Lys
>WENV183735628
PJUB01000261
118157
Betaproteobacteria
GAG
Leu
>WENV183735905
PJUB01010133
494612
Betaproteobacteria
GCA
Cys
>WENV183735965
PJUB01020537
494612
Betaproteobacteria
GCA
Cys
>WENV183735645
PJUB01000310
480973
Betaproteobacteria
GCA
Cys
>WENV183735904
PJUB01010133
283937
Betaproteobacteria
GCC
Gly
>WENV183735906
PJUB01010133
283937
Betaproteobacteria
GCC
Gly
>WENV183735964
PJUB01020537
283937
Betaproteobacteria
GCC
Gly
>WENV183735966
PJUB01020537
283937
Betaproteobacteria
GCC
Gly
>WENV183735992
PJUB01026035
283937
Betaproteobacteria
GCC
Gly
>WENV183735864
PJUB01006338
20508
Betaproteobacteria
GGA
Ser
>WENV183735589
PJUB01000104
20385
Betaproteobacteria
GGA
Ser
>WENV183735680
PJUB01000515
357205
Betaproteobacteria
GGC
Ala
>WENV183735706
PJUB01000727
357205
Betaproteobacteria
GGC
Ala
>WENV183735981
PJUB01023572
357205
Betaproteobacteria
GGC
Ala
>WENV183735808
PJUB01003497
177009
Betaproteobacteria
GGG
Pro
>WENV183735578
PJUB01000071
281431
Betaproteobacteria
GTT
Asn
>WENV183735718
PJUB01000856
76492
Betaproteobacteria
TAA
Leu
>WENV183735656
PJUB01000344
328657
Betaproteobacteria
TAC
Val
>WENV183735749
PJUB01001239
183734
Betaproteobacteria
TCT
Arg
>WENV183735726
PJUB01000932
56355
Betaproteobacteria
TGA
Ser
>WENV183735892
PJUB01008899
29780
Betaproteobacteria
TGA
Ser
>WENV183735872
PJUB01006994
282862
Betaproteobacteria
TGC
Ala
>WENV183735934
PJUB01013944
282862
Betaproteobacteria
TGC
Ala
>WENV183735580
PJUB01000082
298213
Betaproteobacteria
TGT
Thr
>WENV183736004
PJUB01029973
283940
Betaproteobacteria
TTC
Glu
>WENV183735667
PJUB01000385
178289
Betaproteobacteria
TTG
Gln
>WENV183735818
PJUB01003852
281681
Betaproteobacteria
TTT
Lys
>WENV183735590
PJUB01000108
283018
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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