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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170376009
CETU01032052
73534
Cyanobacteriota
CAG
Leu
>WENV170377480
CETU01161697
185831
Cyanobacteriota
CAT
Met
>WENV170376869
CETU01104656
177220
Cyanobacteriota
CAT
Met
>WENV170377506
CETU01163025
178673
Cyanobacteriota
CCG
Arg
>WENV170376544
CETU01076615
29722
Cyanobacteriota
CGA
Ser
>WENV170375600
CETU01005907
326453
Cyanobacteriota
CGC
Ala
>WENV170375891
CETU01023465
208578
Cyanobacteriota
CGG
Pro
>WENV170376139
CETU01041304
414584
Cyanobacteriota
GAC
Val
>WENV170376405
CETU01063577
14711
Cyanobacteriota
GCT
Ser
>WENV170376876
CETU01105692
30885
Cyanobacteriota
GGA
Ser
>WENV170376235
CETU01048687
219114
Cyanobacteriota
GGG
Pro
>WENV170376815
CETU01099023
212126
Cyanobacteriota
GTC
Asp
>WENV170376127
CETU01040359
177076
Cyanobacteriota
GTC
Asp
>WENV170376713
CETU01089443
177076
Cyanobacteriota
GTC
Asp
>WENV170376273
CETU01052296
283431
Cyanobacteriota
GTG
His
>WENV170376586
CETU01080344
283431
Cyanobacteriota
GTG
His
>WENV170376548
CETU01077468
400477
Cyanobacteriota
GTT
Asn
>WENV170376602
CETU01081963
400477
Cyanobacteriota
GTT
Asn
>WENV170376998
CETU01120488
400477
Cyanobacteriota
GTT
Asn
>WENV170376826
CETU01100346
46946
Cyanobacteriota
TAA
Leu
>WENV170377183
CETU01138713
118688
Cyanobacteriota
TAG
Leu
>WENV170376741
CETU01092430
400475
Cyanobacteriota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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