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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV001439
AY878144
164551
Euryarchaeota
>ENV001440
AY878145
164551
Euryarchaeota
>ENV005253
EF584002
178890
Euryarchaeota
GAA
Phe
>ENV005251
EF583989
158929
Euryarchaeota
GAC
Val
>ENV004069
DQ314494
413357
Euryarchaeota
GGT
Thr
>ENV000758
AM114193
284163
Euryarchaeota
GTT
Asn
>ENV001417
AY878122
219464
Euryarchaeota
TGC
Ala
>ENV001418
AY878123
219464
Euryarchaeota
TGC
Ala
>ENV001419
AY878124
219464
Euryarchaeota
TGC
Ala
>ENV001421
AY878126
219464
Euryarchaeota
TGC
Ala
>ENV001422
AY878127
219464
Euryarchaeota
TGC
Ala
>ENV001423
AY878128
219464
Euryarchaeota
TGC
Ala
>ENV001424
AY878129
219464
Euryarchaeota
TGC
Ala
>ENV001425
AY878130
219464
Euryarchaeota
TGC
Ala
>ENV001426
AY878131
219464
Euryarchaeota
TGC
Ala
>ENV001427
AY878132
219464
Euryarchaeota
TGC
Ala
>ENV001428
AY878133
219464
Euryarchaeota
TGC
Ala
>ENV001429
AY878134
219464
Euryarchaeota
TGC
Ala
>ENV001430
AY878135
219464
Euryarchaeota
TGC
Ala
>ENV001431
AY878136
219464
Euryarchaeota
TGC
Ala
>ENV001432
AY878137
219464
Euryarchaeota
TGC
Ala
>ENV001433
AY878138
219464
Euryarchaeota
TGC
Ala
>ENV001442
AY878147
219464
Euryarchaeota
TGC
Ala
>ENV001444
AY878149
219464
Euryarchaeota
TGC
Ala
>ENV000329
AF291168
400618
Euryarchaeota
TGC
Ala
>ENV000330
AF291169
400618
Euryarchaeota
TGC
Ala
>ENV004067
DQ314493
400618
Euryarchaeota
TGC
Ala
>ENV004071
DQ314494
400618
Euryarchaeota
TGC
Ala
>ENV001434
AY878139
179313
Euryarchaeota
TGC
Ala
>ENV001435
AY878140
179313
Euryarchaeota
TGC
Ala
>ENV001436
AY878141
179313
Euryarchaeota
TGC
Ala
>ENV001437
AY878142
179313
Euryarchaeota
TGC
Ala
>ENV001438
AY878143
179313
Euryarchaeota
TGC
Ala
>ENV001441
AY878146
179313
Euryarchaeota
TGC
Ala
>ENV001443
AY878148
179313
Euryarchaeota
TGC
Ala
>ENV003044
CR937011
284154
Euryarchaeota
TGC
Ala
>ENV000764
AM114193
156252
Euryarchaeota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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