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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183621865
OOFV01000210
270352
Gammaproteobacteria
GCC
Gly
>WENV183621866
OOFV01000210
411842
Gammaproteobacteria
GCA
Cys
>WENV183621914
OOFV01000713
247974
Gammaproteobacteria
CCA
Trp
>WENV183621931
OOFV01000890
16840
Gammaproteobacteria
GGA
Ser
>WENV183621937
OOFV01000926
288517
Gammaproteobacteria
TGT
Thr
>WENV183621940
OOFV01000964
288517
Gammaproteobacteria
TGT
Thr
>WENV183621951
OOFV01001237
248041
Gammaproteobacteria
GGC
Ala
>WENV183622004
OOFV01002666
236366
Gammaproteobacteria
GTG
His
>WENV183622054
OOFV01004680
322642
Gammaproteobacteria
GGT
Thr
>WENV183622056
OOFV01004753
312287
Gammaproteobacteria
TGT
Thr
>WENV183622143
OOFV01008917
149661
Gammaproteobacteria
CAT
Met
>WENV183622200
OOFV01012539
245770
Gammaproteobacteria
TTT
Lys
>WENV183622405
OOFV01042579
322642
Gammaproteobacteria
GGT
Thr
>WENV183622579
OOFV01093068
235452
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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