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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183717147
PDWJ01000505
176662
Gammaproteobacteria
ACG
Arg
>WENV183717305
PDWJ01000712
176662
Gammaproteobacteria
ACG
Arg
>WENV183720249
PDWJ01030357
178175
Gammaproteobacteria
ACG
Arg
>WENV183718932
PDWJ01007846
230011
Gammaproteobacteria
ACG
Arg
>WENV183721668
PDWJ01079780
74110
Gammaproteobacteria
CAA
Leu
>WENV183719929
PDWJ01023211
179284
Gammaproteobacteria
CAT
Met
>WENV183720050
PDWJ01025363
178469
Gammaproteobacteria
CAT
Met
>WENV183717558
PDWJ01001119
221027
Gammaproteobacteria
CAT
Met
>WENV183718698
PDWJ01005935
221027
Gammaproteobacteria
CAT
Met
>WENV183720236
PDWJ01029951
181365
Gammaproteobacteria
CAT
Met
>WENV183720873
PDWJ01047889
181365
Gammaproteobacteria
CAT
Met
>WENV183721043
PDWJ01053087
181365
Gammaproteobacteria
CAT
Met
>WENV183721256
PDWJ01061082
181365
Gammaproteobacteria
CAT
Met
>WENV183721277
PDWJ01062142
181365
Gammaproteobacteria
CAT
Met
>WENV183721458
PDWJ01070650
181365
Gammaproteobacteria
CAT
Met
>WENV183721925
PDWJ01094827
181365
Gammaproteobacteria
CAT
Met
>WENV183722476
PDWJ01132136
181365
Gammaproteobacteria
CAT
Met
>WENV183722597
PDWJ01141712
181365
Gammaproteobacteria
CAT
Met
>WENV183716896
PDWJ01000248
181365
Gammaproteobacteria
CAT
Met
>WENV183719327
PDWJ01012387
181365
Gammaproteobacteria
CAT
Met
>WENV183719404
PDWJ01013852
181365
Gammaproteobacteria
CAT
Met
>WENV183722621
PDWJ01143697
190582
Gammaproteobacteria
CAT
Met
>WENV183720288
PDWJ01030935
281437
Gammaproteobacteria
CCA
Trp
>WENV183720698
PDWJ01042006
281437
Gammaproteobacteria
CCA
Trp
>WENV183721703
PDWJ01081410
281437
Gammaproteobacteria
CCA
Trp
>WENV183721938
PDWJ01095795
209464
Gammaproteobacteria
CCG
Arg
>WENV183717353
PDWJ01000781
179889
Gammaproteobacteria
CCT
Arg
>WENV183717910
PDWJ01001942
179889
Gammaproteobacteria
CCT
Arg
>WENV183722463
PDWJ01131138
283481
Gammaproteobacteria
GAA
Phe
>WENV183717949
PDWJ01002016
280812
Gammaproteobacteria
GAA
Phe
>WENV183719038
PDWJ01009074
280812
Gammaproteobacteria
GAA
Phe
>WENV183716675
PDWJ01000131
346373
Gammaproteobacteria
GAA
Phe
>WENV183718908
PDWJ01007598
346373
Gammaproteobacteria
GAA
Phe
>WENV183719959
PDWJ01023907
346373
Gammaproteobacteria
GAA
Phe
>WENV183717656
PDWJ01001333
179710
Gammaproteobacteria
GAC
Val
>WENV183716515
PDWJ01000032
179710
Gammaproteobacteria
GAC
Val
>WENV183718995
PDWJ01008583
219509
Gammaproteobacteria
GAT
Ile
>WENV183717462
PDWJ01000954
500085
Gammaproteobacteria
GCA
Cys
>WENV183719519
PDWJ01015513
500085
Gammaproteobacteria
GCA
Cys
>WENV183719886
PDWJ01022269
500085
Gammaproteobacteria
GCA
Cys
>WENV183721542
PDWJ01074527
500085
Gammaproteobacteria
GCA
Cys
>WENV183717106
PDWJ01000469
508107
Gammaproteobacteria
GCA
Cys
>WENV183720177
PDWJ01028524
488965
Gammaproteobacteria
GCA
Cys
>WENV183721347
PDWJ01065284
488965
Gammaproteobacteria
GCA
Cys
>WENV183722552
PDWJ01138247
488965
Gammaproteobacteria
GCA
Cys
>WENV183716985
PDWJ01000329
306288
Gammaproteobacteria
GCC
Gly
>WENV183717006
PDWJ01000365
306288
Gammaproteobacteria
GCC
Gly
>WENV183717619
PDWJ01001231
306288
Gammaproteobacteria
GCC
Gly
>WENV183717912
PDWJ01001956
306288
Gammaproteobacteria
GCC
Gly
>WENV183721249
PDWJ01060816
306288
Gammaproteobacteria
GCC
Gly
>WENV183721590
PDWJ01076247
306288
Gammaproteobacteria
GCC
Gly
>WENV183721586
PDWJ01076029
281276
Gammaproteobacteria
GGT
Thr
>WENV183718832
PDWJ01006866
302377
Gammaproteobacteria
GTT
Asn
>WENV183718138
PDWJ01002562
282550
Gammaproteobacteria
TAC
Val
>WENV183718073
PDWJ01002297
282893
Gammaproteobacteria
TAC
Val
>WENV183718672
PDWJ01005770
126986
Gammaproteobacteria
TAG
Leu
>WENV183721844
PDWJ01090573
517041
Gammaproteobacteria
TCC
Gly
>WENV183719118
PDWJ01009865
402011
Gammaproteobacteria
TCC
Gly
>WENV183721378
PDWJ01066291
357066
Gammaproteobacteria
TGC
Ala
>WENV183720755
PDWJ01043988
317792
Gammaproteobacteria
TGC
Ala
>WENV183717500
PDWJ01001012
243308
Gammaproteobacteria
TGG
Pro
>WENV183718182
PDWJ01002713
243308
Gammaproteobacteria
TGG
Pro
>WENV183718539
PDWJ01004723
176791
Gammaproteobacteria
TGG
Pro
>WENV183717346
PDWJ01000774
179186
Gammaproteobacteria
TGG
Pro
>WENV183719721
PDWJ01019179
179186
Gammaproteobacteria
TGG
Pro
>WENV183721904
PDWJ01093705
179186
Gammaproteobacteria
TGG
Pro
>WENV183722008
PDWJ01099677
179186
Gammaproteobacteria
TGG
Pro
>WENV183717481
PDWJ01000977
201377
Gammaproteobacteria
TGG
Pro
>WENV183718603
PDWJ01005320
296670
Gammaproteobacteria
TGT
Thr
>WENV183717374
PDWJ01000824
334421
Gammaproteobacteria
TGT
Thr
>WENV183719116
PDWJ01009865
334421
Gammaproteobacteria
TGT
Thr
>WENV183718223
PDWJ01002866
282902
Gammaproteobacteria
TGT
Thr
>WENV183718759
PDWJ01006399
282902
Gammaproteobacteria
TGT
Thr
>WENV183721450
PDWJ01070308
282902
Gammaproteobacteria
TGT
Thr
>WENV183716688
PDWJ01000134
284039
Gammaproteobacteria
TTC
Glu
>WENV183716689
PDWJ01000134
284039
Gammaproteobacteria
TTC
Glu
>WENV183716983
PDWJ01000329
284039
Gammaproteobacteria
TTC
Glu
>WENV183717548
PDWJ01001106
284039
Gammaproteobacteria
TTC
Glu
>WENV183717620
PDWJ01001231
284039
Gammaproteobacteria
TTC
Glu
>WENV183717663
PDWJ01001338
284039
Gammaproteobacteria
TTC
Glu
>WENV183719683
PDWJ01018591
284039
Gammaproteobacteria
TTC
Glu
>WENV183720104
PDWJ01026432
284039
Gammaproteobacteria
TTC
Glu
>WENV183720105
PDWJ01026432
284039
Gammaproteobacteria
TTC
Glu
>WENV183720128
PDWJ01027128
284039
Gammaproteobacteria
TTC
Glu
>WENV183720474
PDWJ01035159
284039
Gammaproteobacteria
TTC
Glu
>WENV183720475
PDWJ01035159
284039
Gammaproteobacteria
TTC
Glu
>WENV183720787
PDWJ01045408
284039
Gammaproteobacteria
TTC
Glu
>WENV183721813
PDWJ01088789
284039
Gammaproteobacteria
TTC
Glu
>WENV183721814
PDWJ01088789
284039
Gammaproteobacteria
TTC
Glu
>WENV183721815
PDWJ01088789
284039
Gammaproteobacteria
TTC
Glu
>WENV183722101
PDWJ01105659
284039
Gammaproteobacteria
TTC
Glu
>WENV183719398
PDWJ01013782
438674
Gammaproteobacteria
TTC
Glu
>WENV183717764
PDWJ01001553
284693
Gammaproteobacteria
TTC
Glu
>WENV183717761
PDWJ01001553
284693
Gammaproteobacteria
TTC
Glu
>WENV183717762
PDWJ01001553
284693
Gammaproteobacteria
TTC
Glu
>WENV183716680
PDWJ01000132
347008
Gammaproteobacteria
TTC
Glu
>WENV183716701
PDWJ01000142
347008
Gammaproteobacteria
TTC
Glu
>WENV183718392
PDWJ01003742
347008
Gammaproteobacteria
TTC
Glu
>WENV183718794
PDWJ01006592
347008
Gammaproteobacteria
TTC
Glu
>WENV183720690
PDWJ01041740
347008
Gammaproteobacteria
TTC
Glu
>WENV183721275
PDWJ01062086
347008
Gammaproteobacteria
TTC
Glu
>WENV183721865
PDWJ01091826
347008
Gammaproteobacteria
TTC
Glu
>WENV183722360
PDWJ01122494
347008
Gammaproteobacteria
TTC
Glu
>WENV183719029
PDWJ01008941
347008
Gammaproteobacteria
TTC
Glu
>WENV183719205
PDWJ01010733
347008
Gammaproteobacteria
TTC
Glu
>WENV183719238
PDWJ01010984
347008
Gammaproteobacteria
TTC
Glu
>WENV183719782
PDWJ01020220
347008
Gammaproteobacteria
TTC
Glu
>WENV183717454
PDWJ01000944
287558
Gammaproteobacteria
TTC
Glu
>WENV183719527
PDWJ01015590
281432
Gammaproteobacteria
TTG
Gln
>WENV183720026
PDWJ01025101
281432
Gammaproteobacteria
TTG
Gln
>WENV183721662
PDWJ01079516
281432
Gammaproteobacteria
TTG
Gln
>WENV183721663
PDWJ01079516
281432
Gammaproteobacteria
TTG
Gln
>WENV183717677
PDWJ01001384
304066
Gammaproteobacteria
TTT
Lys
>WENV183716513
PDWJ01000032
290068
Gammaproteobacteria
TTT
Lys
>WENV183716514
PDWJ01000032
290068
Gammaproteobacteria
TTT
Lys
>WENV183717654
PDWJ01001333
290068
Gammaproteobacteria
TTT
Lys
>WENV183716825
PDWJ01000215
283282
Gammaproteobacteria
TTT
Lys
>WENV183717397
PDWJ01000855
283282
Gammaproteobacteria
TTT
Lys
>WENV183719999
PDWJ01024477
283282
Gammaproteobacteria
TTT
Lys
>WENV183720000
PDWJ01024477
283282
Gammaproteobacteria
TTT
Lys
>WENV183721743
PDWJ01083406
283282
Gammaproteobacteria
TTT
Lys
>WENV183721826
PDWJ01089411
283282
Gammaproteobacteria
TTT
Lys
>WENV183721827
PDWJ01089411
283282
Gammaproteobacteria
TTT
Lys
>WENV183721853
PDWJ01090985
283282
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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