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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183728039
PJTP01021253
165964
Gammaproteobacteria
ACG
Arg
>WENV183728038
PJTP01021253
165964
Gammaproteobacteria
ACG
Arg
>WENV183728037
PJTP01021253
165964
Gammaproteobacteria
ACG
Arg
>WENV183727689
PJTP01000091
165964
Gammaproteobacteria
ACG
Arg
>WENV183727688
PJTP01000091
165964
Gammaproteobacteria
ACG
Arg
>WENV183727687
PJTP01000091
165964
Gammaproteobacteria
ACG
Arg
>WENV183727686
PJTP01000091
165964
Gammaproteobacteria
ACG
Arg
>WENV183728166
PJTP01052915
165964
Gammaproteobacteria
ACG
Arg
>WENV183727723
PJTP01000099
147373
Gammaproteobacteria
CAT
Met
>WENV183728097
PJTP01033430
147373
Gammaproteobacteria
CAT
Met
>WENV183727751
PJTP01000147
261213
Gammaproteobacteria
CAT
Met
>WENV183727745
PJTP01000142
179150
Gammaproteobacteria
CAT
Met
>WENV183727744
PJTP01000142
179150
Gammaproteobacteria
CAT
Met
>WENV183727743
PJTP01000142
179150
Gammaproteobacteria
CAT
Met
>WENV183727668
PJTP01000075
145334
Gammaproteobacteria
CCG
Arg
>WENV183727690
PJTP01000091
147595
Gammaproteobacteria
CCT
Arg
>WENV183728048
PJTP01023731
238307
Gammaproteobacteria
GAA
Phe
>WENV183727665
PJTP01000071
238307
Gammaproteobacteria
GAA
Phe
>WENV183727576
PJTP01000022
161963
Gammaproteobacteria
GAC
Val
>WENV183727628
PJTP01000048
16446
Gammaproteobacteria
GCT
Ser
>WENV183727685
PJTP01000091
16446
Gammaproteobacteria
GCT
Ser
>WENV183728036
PJTP01021253
16446
Gammaproteobacteria
GCT
Ser
>WENV183727760
PJTP01000166
23711
Gammaproteobacteria
GGA
Ser
>WENV183728185
PJTP01058314
23711
Gammaproteobacteria
GGA
Ser
>WENV183727653
PJTP01000063
49010
Gammaproteobacteria
GGA
Ser
>WENV183727728
PJTP01000108
49010
Gammaproteobacteria
GGA
Ser
>WENV183727489
PJTP01000006
173286
Gammaproteobacteria
GGG
Pro
>WENV183728196
PJTP01061994
176256
Gammaproteobacteria
GTC
Asp
>WENV183727748
PJTP01000145
176256
Gammaproteobacteria
GTC
Asp
>WENV183727747
PJTP01000145
176256
Gammaproteobacteria
GTC
Asp
>WENV183727691
PJTP01000092
176256
Gammaproteobacteria
GTC
Asp
>WENV183727694
PJTP01000092
237462
Gammaproteobacteria
GTG
His
>WENV183727664
PJTP01000070
96066
Gammaproteobacteria
TAA
Leu
>WENV183727542
PJTP01000015
96065
Gammaproteobacteria
TAG
Leu
>WENV183727621
PJTP01000043
161470
Gammaproteobacteria
TCT
Arg
>WENV183727670
PJTP01000077
47140
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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