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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183740003
PJUF01000131
179475
Gammaproteobacteria
ACG
Arg
>WENV183740004
PJUF01000131
179475
Gammaproteobacteria
ACG
Arg
>WENV183739844
PJUF01000028
205770
Gammaproteobacteria
ACG
Arg
>WENV183739845
PJUF01000028
205770
Gammaproteobacteria
ACG
Arg
>WENV183739846
PJUF01000028
205770
Gammaproteobacteria
ACG
Arg
>WENV183739847
PJUF01000028
205770
Gammaproteobacteria
ACG
Arg
>WENV183741299
PJUF01079539
205770
Gammaproteobacteria
ACG
Arg
>WENV183740181
PJUF01000639
117930
Gammaproteobacteria
CAA
Leu
>WENV183740964
PJUF01022159
139332
Gammaproteobacteria
CAG
Leu
>WENV183740016
PJUF01000145
480368
Gammaproteobacteria
CCC
Gly
>WENV183740579
PJUF01003672
480368
Gammaproteobacteria
CCC
Gly
>WENV183739974
PJUF01000103
176627
Gammaproteobacteria
CCG
Arg
>WENV183739848
PJUF01000028
179074
Gammaproteobacteria
CCT
Arg
>WENV183740262
PJUF01000868
20224
Gammaproteobacteria
CGA
Ser
>WENV183740452
PJUF01002299
20224
Gammaproteobacteria
CGA
Ser
>WENV183740487
PJUF01002637
371167
Gammaproteobacteria
CGC
Ala
>WENV183741230
PJUF01061481
481358
Gammaproteobacteria
CTG
Gln
>WENV183740053
PJUF01000224
400853
Gammaproteobacteria
CTG
Gln
>WENV183740054
PJUF01000224
400853
Gammaproteobacteria
CTG
Gln
>WENV183740677
PJUF01006086
74718
Gammaproteobacteria
GAG
Leu
>WENV183740250
PJUF01000843
481357
Gammaproteobacteria
GCA
Cys
>WENV183740193
PJUF01000671
481287
Gammaproteobacteria
GCA
Cys
>WENV183740903
PJUF01016686
10977
Gammaproteobacteria
GCT
Ser
>WENV183739843
PJUF01000028
20472
Gammaproteobacteria
GCT
Ser
>WENV183740001
PJUF01000131
12365
Gammaproteobacteria
GCT
Ser
>WENV183740729
PJUF01007621
72298
Gammaproteobacteria
GGA
Ser
>WENV183740113
PJUF01000367
29777
Gammaproteobacteria
GGA
Ser
>WENV183740911
PJUF01017274
185120
Gammaproteobacteria
GGG
Pro
>WENV183740287
PJUF01001014
225941
Gammaproteobacteria
GGG
Pro
>WENV183740763
PJUF01009273
139713
Gammaproteobacteria
GTA
Tyr
>WENV183740017
PJUF01000152
118322
Gammaproteobacteria
TAA
Leu
>WENV183740258
PJUF01000868
398939
Gammaproteobacteria
TAC
Val
>WENV183739958
PJUF01000100
118321
Gammaproteobacteria
TAG
Leu
>WENV183740670
PJUF01005982
517041
Gammaproteobacteria
TCC
Gly
>WENV183739996
PJUF01000126
63595
Gammaproteobacteria
TGA
Ser
>WENV183740149
PJUF01000486
38349
Gammaproteobacteria
TGA
Ser
>WENV183739913
PJUF01000065
330651
Gammaproteobacteria
TGT
Thr
>WENV183741340
PJUF01090149
330651
Gammaproteobacteria
TGT
Thr
>WENV183741352
PJUF01095353
330651
Gammaproteobacteria
TGT
Thr
>WENV183740323
PJUF01001183
284316
Gammaproteobacteria
TGT
Thr
>WENV183740341
PJUF01001261
284316
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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