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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183633548
OOIG01000966
344751
Verrucomicrobiota
GGT
Thr
>WENV183633549
OOIG01000966
287733
Verrucomicrobiota
CCA
Trp
>WENV183633661
OOIG01001702
345123
Verrucomicrobiota
TGT
Thr
>WENV183633713
OOIG01001993
155264
Verrucomicrobiota
GGG
Pro
>WENV183633781
OOIG01002627
344842
Verrucomicrobiota
CGT
Thr
>WENV183633782
OOIG01002627
246677
Verrucomicrobiota
CTT
Lys
>WENV183633787
OOIG01002689
7274
Verrucomicrobiota
CGA
Ser
>WENV183633881
OOIG01003845
60880
Verrucomicrobiota
CAG
Leu
>WENV183633924
OOIG01004435
246700
Verrucomicrobiota
TTC
Glu
>WENV183633941
OOIG01004646
155268
Verrucomicrobiota
CGG
Pro
>WENV183633951
OOIG01004738
170105
Verrucomicrobiota
CAT
Met
>WENV183633968
OOIG01005116
345141
Verrucomicrobiota
TTG
Gln
>WENV183633977
OOIG01005306
246709
Verrucomicrobiota
CAT
Met
>WENV183633981
OOIG01005416
246687
Verrucomicrobiota
CGC
Ala
>WENV183633986
OOIG01005569
345142
Verrucomicrobiota
CCG
Arg
>WENV183634052
OOIG01007126
344841
Verrucomicrobiota
CAC
Val
>WENV183634069
OOIG01007908
246260
Verrucomicrobiota
>WENV183634109
OOIG01009132
128202
Verrucomicrobiota
GTC
Asp
>WENV183634129
OOIG01009737
155256
Verrucomicrobiota
TCT
Arg
>WENV183634138
OOIG01010191
246728
Verrucomicrobiota
GAA
Phe
>WENV183634139
OOIG01010191
154693
Verrucomicrobiota
TGG
Pro
>WENV183634141
OOIG01010246
414625
Verrucomicrobiota
CCC
Gly
>WENV183634150
OOIG01010517
246701
Verrucomicrobiota
TTT
Lys
>WENV183634164
OOIG01010981
344839
Verrucomicrobiota
GTG
His
>WENV183634170
OOIG01011208
345133
Verrucomicrobiota
GAC
Val
>WENV183634209
OOIG01011942
405704
Verrucomicrobiota
GCC
Gly
>WENV183634218
OOIG01012141
119661
Verrucomicrobiota
CAA
Leu
>WENV183634273
OOIG01013808
82056
Verrucomicrobiota
TAA
Leu
>WENV183634290
OOIG01014726
344845
Verrucomicrobiota
CTG
Gln
>WENV183634341
OOIG01018124
345110
Verrucomicrobiota
CCT
Arg
>WENV183634456
OOIG01029595
344844
Verrucomicrobiota
GCA
Cys
>WENV183634460
OOIG01030515
345124
Verrucomicrobiota
GTT
Asn
>WENV183634640
OOIG01075550
345115
Verrucomicrobiota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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