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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183637413
OQVH01000112
82054
Verrucomicrobiota
GTA
Tyr
>WENV183637412
OQVH01000112
345124
Verrucomicrobiota
GTT
Asn
>WENV183637498
OQVH01000298
97755
Verrucomicrobiota
TAG
Leu
>WENV183637590
OQVH01000630
246701
Verrucomicrobiota
TTT
Lys
>WENV183637594
OQVH01000646
7274
Verrucomicrobiota
CGA
Ser
>WENV183637610
OQVH01000694
82056
Verrucomicrobiota
TAA
Leu
>WENV183637611
OQVH01000694
246260
Verrucomicrobiota
>WENV183637612
OQVH01000694
7256
Verrucomicrobiota
GCT
Ser
>WENV183637625
OQVH01000764
17023
Verrucomicrobiota
GGA
Ser
>WENV183637626
OQVH01000772
155256
Verrucomicrobiota
TCT
Arg
>WENV183637628
OQVH01000809
344844
Verrucomicrobiota
GCA
Cys
>WENV183637629
OQVH01000809
246700
Verrucomicrobiota
TTC
Glu
>WENV183637630
OQVH01000809
344839
Verrucomicrobiota
GTG
His
>WENV183637631
OQVH01000809
246709
Verrucomicrobiota
CAT
Met
>WENV183637635
OQVH01000835
155268
Verrucomicrobiota
CGG
Pro
>WENV183637636
OQVH01000841
344751
Verrucomicrobiota
GGT
Thr
>WENV183637645
OQVH01000878
82181
Verrucomicrobiota
AAG
Leu
>WENV183637657
OQVH01000915
344841
Verrucomicrobiota
CAC
Val
>WENV183637686
OQVH01001090
345123
Verrucomicrobiota
TGT
Thr
>WENV183637707
OQVH01001218
287733
Verrucomicrobiota
CCA
Trp
>WENV183637739
OQVH01001474
119661
Verrucomicrobiota
CAA
Leu
>WENV183637756
OQVH01001570
246677
Verrucomicrobiota
CTT
Lys
>WENV183637755
OQVH01001570
344842
Verrucomicrobiota
CGT
Thr
>WENV183637764
OQVH01001618
345141
Verrucomicrobiota
TTG
Gln
>WENV183637769
OQVH01001636
345110
Verrucomicrobiota
CCT
Arg
>WENV183637784
OQVH01001841
246728
Verrucomicrobiota
GAA
Phe
>WENV183637785
OQVH01001841
154693
Verrucomicrobiota
TGG
Pro
>WENV183637789
OQVH01001876
405704
Verrucomicrobiota
GCC
Gly
>WENV183637823
OQVH01002266
345115
Verrucomicrobiota
CAT
Met
>WENV183637838
OQVH01002407
170105
Verrucomicrobiota
CAT
Met
>WENV183637840
OQVH01002428
414625
Verrucomicrobiota
CCC
Gly
>WENV183637839
OQVH01002428
419909
Verrucomicrobiota
TCC
Gly
>WENV183637856
OQVH01002599
344845
Verrucomicrobiota
CTG
Gln
>WENV183637878
OQVH01002919
246687
Verrucomicrobiota
CGC
Ala
>WENV183637900
OQVH01003243
60880
Verrucomicrobiota
CAG
Leu
>WENV183637939
OQVH01003810
46246
Verrucomicrobiota
TGA
Ser
>WENV183637949
OQVH01003963
345133
Verrucomicrobiota
GAC
Val
>WENV183637966
OQVH01004437
155264
Verrucomicrobiota
GGG
Pro
>WENV183637991
OQVH01004816
405704
Verrucomicrobiota
GCC
Gly
>WENV183638078
OQVH01007167
345142
Verrucomicrobiota
CCG
Arg
>WENV183638296
OQVH01022637
345119
Verrucomicrobiota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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