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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV078595
AAQK01002947
451658
Actinomycetota
CCG
Arg
>WENV078765
AAQK01010113
180100
Actinomycetota
GTA
Tyr
>WENV078636
AAQK01004473
451412
Actinomycetota
GTT
Asn
>WENV078676
AAQK01006249
451412
Actinomycetota
GTT
Asn
>WENV078736
AAQK01009504
451412
Actinomycetota
GTT
Asn
>WENV078706
AAQK01008145
271422
Actinomycetota
GGG
Pro
>WENV078742
AAQK01009679
451381
Actinomycetota
CGT
Thr
>WENV078593
AAQK01002841
451359
Actinomycetota
TTT
Lys
>WENV078768
AAQK01010117
30276
Actinomycetota
GCT
Ser
>WENV078677
AAQK01006252
30281
Actinomycetota
GAG
Leu
>WENV078698
AAQK01007513
270486
Actinomycetota
CGG
Pro
>WENV078550
AAQK01000986
451442
Actinomycetota
GGC
Ala
>WENV078623
AAQK01004250
451442
Actinomycetota
GGC
Ala
>WENV078576
AAQK01002159
270467
Actinomycetota
TGG
Pro
>WENV078678
AAQK01006306
664088
Actinomycetota
GAC
Val
>WENV078574
AAQK01002063
86856
Actinomycetota
TGA
Ser
>WENV078640
AAQK01004637
30363
Actinomycetota
GCT
Ser
>WENV078624
AAQK01004288
451655
Actinomycetota
CCA
Trp
>WENV078766
AAQK01010113
271229
Actinomycetota
CAT
Met
>WENV078647
AAQK01004765
451474
Actinomycetota
CAC
Val
>WENV078728
AAQK01009163
451474
Actinomycetota
CAC
Val
>WENV078775
AAQK01010294
466795
Actinomycetota
GCC
Gly
>WENV078648
AAQK01004765
653394
Actinomycetota
GAC
Val
>WENV078729
AAQK01009163
653394
Actinomycetota
GAC
Val
>WENV078586
AAQK01002542
779444
Actinomycetota
TTG
Gln
>WENV078741
AAQK01009679
217997
Actinomycetota
TAG
Leu
>WENV078543
AAQK01000804
653368
Actinomycetota
CTG
Gln
>WENV078638
AAQK01004474
653368
Actinomycetota
CTG
Gln
>WENV078708
AAQK01008160
270411
Actinomycetota
ACG
Arg
>WENV078762
AAQK01010096
451349
Actinomycetota
CCG
Arg
>WENV078545
AAQK01000901
451413
Actinomycetota
CCT
Arg
>WENV078617
AAQK01004177
271533
Actinomycetota
TCT
Arg
>WENV078649
AAQK01004765
779447
Actinomycetota
GCA
Cys
>WENV078555
AAQK01001196
270415
Actinomycetota
TAT
Ile
>WENV078575
AAQK01002072
270417
Actinomycetota
CAA
Leu
>WENV078631
AAQK01004387
779382
Actinomycetota
TTG
Gln
>WENV078553
AAQK01001087
270403
Actinomycetota
TGT
Thr
>WENV078554
AAQK01001129
451410
Actinomycetota
CGT
Thr
>WENV078632
AAQK01004440
72674
Actinomycetota
CGA
Ser
>WENV078603
AAQK01003616
653819
Actinomycetota
TTC
Glu
>WENV078764
AAQK01010098
653353
Actinomycetota
GAC
Val
>WENV078604
AAQK01003616
270451
Actinomycetota
GTC
Asp
>WENV078615
AAQK01004124
153767
Actinomycetota
CAG
Leu
>WENV078737
AAQK01009504
451432
Actinomycetota
GTT
Asn
>WENV078583
AAQK01002342
451469
Actinomycetota
GTG
His
>WENV078740
AAQK01009656
86885
Actinomycetota
GGA
Ser
>WENV078672
AAQK01006219
779392
Actinomycetota
CCC
Gly
>WENV078779
AAQK01010371
270520
Actinomycetota
CAT
Met
>WENV078580
AAQK01002305
451443
Actinomycetota
TGC
Ala
>WENV078544
AAQK01000804
451402
Actinomycetota
CTC
Glu
>WENV078637
AAQK01004474
451402
Actinomycetota
CTC
Glu
>WENV078549
AAQK01000986
452508
Actinomycetota
TGC
Ala
>WENV078774
AAQK01010270
274019
Actinomycetota
TAC
Val
>WENV078659
AAQK01005404
270705
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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