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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085470
BABD01000107
86857
Bacteroidota
TAA
Leu
>WENV085457
BABD01000043
451354
Bacteroidota
TTT
Lys
>WENV085524
BABD01000500
451354
Bacteroidota
TTT
Lys
>WENV085871
BABD01023497
284758
Bacteroidota
GAT
Ile
>WENV085592
BABD01001605
658239
Bacteroidota
CTC
Glu
>WENV085478
BABD01000174
87355
Bacteroidota
TGA
Ser
>WENV085490
BABD01000219
87355
Bacteroidota
TGA
Ser
>WENV085908
BABD01031657
30278
Bacteroidota
GGA
Ser
>WENV085495
BABD01000332
218000
Bacteroidota
CAG
Leu
>WENV085498
BABD01000332
218000
Bacteroidota
CAG
Leu
>WENV085917
BABD01033951
283437
Bacteroidota
TGT
Thr
>WENV085698
BABD01006878
153684
Bacteroidota
GTA
Tyr
>WENV085674
BABD01005071
180313
Bacteroidota
TAG
Leu
>WENV085476
BABD01000174
86859
Bacteroidota
TGA
Ser
>WENV085670
BABD01004632
86859
Bacteroidota
TGA
Ser
>WENV085732
BABD01009097
451389
Bacteroidota
GCC
Gly
>WENV085655
BABD01003880
277204
Bacteroidota
GTC
Asp
>WENV085776
BABD01011786
277204
Bacteroidota
GTC
Asp
>WENV085593
BABD01001615
240600
Bacteroidota
GGG
Pro
>WENV085467
BABD01000094
279189
Bacteroidota
GTT
Asn
>WENV085468
BABD01000094
279189
Bacteroidota
GTT
Asn
>WENV085469
BABD01000094
279189
Bacteroidota
GTT
Asn
>WENV085461
BABD01000065
451484
Bacteroidota
CAT
Met
>WENV085460
BABD01000065
451484
Bacteroidota
CAT
Met
>WENV085764
BABD01010042
653343
Bacteroidota
CCT
Arg
>WENV085742
BABD01009348
30567
Bacteroidota
GGA
Ser
>WENV085863
BABD01021899
30567
Bacteroidota
GGA
Ser
>WENV085572
BABD01001207
653774
Bacteroidota
CAT
Met
>WENV085937
BABD01036206
653774
Bacteroidota
CAT
Met
>WENV085541
BABD01000602
30277
Bacteroidota
GGA
Ser
>WENV085479
BABD01000182
653350
Bacteroidota
GCA
Cys
>WENV085480
BABD01000182
653350
Bacteroidota
GCA
Cys
>WENV085722
BABD01008256
653350
Bacteroidota
GCA
Cys
>WENV085823
BABD01017677
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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