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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170053071
CDZD01005630
154983
Bacteroidota
GTA
Tyr
>WENV170053338
CDZD01022225
86857
Bacteroidota
TAA
Leu
>WENV170053369
CDZD01022691
470605
Bacteroidota
GAA
Phe
>WENV170053122
CDZD01007272
780666
Bacteroidota
CTG
Gln
>WENV170053387
CDZD01023652
779477
Bacteroidota
TTG
Gln
>WENV170053428
CDZD01025993
779477
Bacteroidota
TTG
Gln
>WENV170053527
CDZD01032115
281406
Bacteroidota
GGC
Ala
>WENV170053314
CDZD01020401
270412
Bacteroidota
GTT
Asn
>WENV170053315
CDZD01020401
270412
Bacteroidota
GTT
Asn
>WENV170053316
CDZD01020401
270412
Bacteroidota
GTT
Asn
>WENV170053666
CDZD01038373
270412
Bacteroidota
GTT
Asn
>WENV170053667
CDZD01038373
270412
Bacteroidota
GTT
Asn
>WENV170053668
CDZD01038373
270412
Bacteroidota
GTT
Asn
>WENV170053669
CDZD01038373
270412
Bacteroidota
GTT
Asn
>WENV170053670
CDZD01038373
270412
Bacteroidota
GTT
Asn
>WENV170053068
CDZD01005196
113533
Bacteroidota
CAG
Leu
>WENV170053591
CDZD01034810
281835
Bacteroidota
TGT
Thr
>WENV170053664
CDZD01038359
779388
Bacteroidota
CTG
Gln
>WENV170053665
CDZD01038359
779388
Bacteroidota
CTG
Gln
>WENV170053663
CDZD01038359
779388
Bacteroidota
CTG
Gln
>WENV170053223
CDZD01015458
451478
Bacteroidota
TTT
Lys
>WENV170052995
CDZD01000469
112241
Bacteroidota
CAA
Leu
>WENV170053451
CDZD01027631
458644
Bacteroidota
CCC
Gly
>WENV170053011
CDZD01001655
783463
Bacteroidota
CTG
Gln
>WENV170053205
CDZD01013863
783463
Bacteroidota
CTG
Gln
>WENV170053803
CDZD01045333
783463
Bacteroidota
CTG
Gln
>WENV170052988
CDZD01000001
113161
Bacteroidota
GAG
Leu
>WENV170052990
CDZD01000001
113161
Bacteroidota
GAG
Leu
>WENV170053806
CDZD01045354
113161
Bacteroidota
GAG
Leu
>WENV170053808
CDZD01045354
113161
Bacteroidota
GAG
Leu
>WENV170053445
CDZD01027586
273124
Bacteroidota
GTC
Asp
>WENV170053538
CDZD01032563
180313
Bacteroidota
TAG
Leu
>WENV170053609
CDZD01035679
180313
Bacteroidota
TAG
Leu
>WENV170053366
CDZD01022252
270514
Bacteroidota
GTT
Asn
>WENV170053511
CDZD01031234
451389
Bacteroidota
GCC
Gly
>WENV170053860
CDZD01048131
451431
Bacteroidota
CCA
Trp
>WENV170053058
CDZD01005180
72680
Bacteroidota
TAA
Leu
>WENV170053384
CDZD01023615
277204
Bacteroidota
GTC
Asp
>WENV170053489
CDZD01030115
240600
Bacteroidota
GGG
Pro
>WENV170053029
CDZD01003078
279189
Bacteroidota
GTT
Asn
>WENV170053825
CDZD01046453
270494
Bacteroidota
CGG
Pro
>WENV170052996
CDZD01000471
270471
Bacteroidota
GGC
Ala
>WENV170053388
CDZD01023773
241460
Bacteroidota
TAC
Val
>WENV170053389
CDZD01023773
241460
Bacteroidota
TAC
Val
>WENV170053512
CDZD01031241
241460
Bacteroidota
TAC
Val
>WENV170053763
CDZD01043038
451484
Bacteroidota
CAT
Met
>WENV170053039
CDZD01004020
30567
Bacteroidota
GGA
Ser
>WENV170053168
CDZD01010867
653388
Bacteroidota
TTC
Glu
>WENV170052989
CDZD01000001
180807
Bacteroidota
CAG
Leu
>WENV170053805
CDZD01045354
180807
Bacteroidota
CAG
Leu
>WENV170053807
CDZD01045354
180807
Bacteroidota
CAG
Leu
>WENV170053074
CDZD01005630
463028
Bacteroidota
CAT
Met
>WENV170053276
CDZD01019059
463028
Bacteroidota
CAT
Met
>WENV170053284
CDZD01019182
463028
Bacteroidota
CAT
Met
>WENV170053429
CDZD01026008
463028
Bacteroidota
CAT
Met
>WENV170053138
CDZD01008142
653774
Bacteroidota
CAT
Met
>WENV170053281
CDZD01019160
653774
Bacteroidota
CAT
Met
>WENV170053690
CDZD01039347
153692
Bacteroidota
GTA
Tyr
>WENV170053129
CDZD01007708
467914
Bacteroidota
GCC
Gly
>WENV170053619
CDZD01036171
467914
Bacteroidota
GCC
Gly
>WENV170053620
CDZD01036171
467914
Bacteroidota
GCC
Gly
>WENV170053390
CDZD01023946
451452
Bacteroidota
CCA
Trp
>WENV170053022
CDZD01002694
270497
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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