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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170053471
CDZD01029074
512564
Verrucomicrobiota
>WENV170053857
CDZD01048024
512564
Verrucomicrobiota
>WENV170053292
CDZD01019382
512568
Verrucomicrobiota
>WENV170053293
CDZD01019382
174737
Verrucomicrobiota
AAG
Leu
>WENV170053473
CDZD01029074
309870
Verrucomicrobiota
ACG
Arg
>WENV170053854
CDZD01048024
309870
Verrucomicrobiota
ACG
Arg
>WENV170053923
CDZD01050489
128638
Verrucomicrobiota
CAG
Leu
>WENV170053922
CDZD01050489
512570
Verrucomicrobiota
CCA
Trp
>WENV170053110
CDZD01006407
734931
Verrucomicrobiota
CCG
Arg
>WENV170053016
CDZD01002217
14953
Verrucomicrobiota
CGA
Ser
>WENV170053464
CDZD01028421
512569
Verrucomicrobiota
CGC
Ala
>WENV170053781
CDZD01043516
512569
Verrucomicrobiota
CGC
Ala
>WENV170053564
CDZD01033469
734932
Verrucomicrobiota
CGT
Thr
>WENV170053711
CDZD01040366
734920
Verrucomicrobiota
CTG
Gln
>WENV170053112
CDZD01006407
512572
Verrucomicrobiota
GAA
Phe
>WENV170053472
CDZD01029074
14952
Verrucomicrobiota
GCT
Ser
>WENV170053858
CDZD01048024
14952
Verrucomicrobiota
GCT
Ser
>WENV170053661
CDZD01038322
53409
Verrucomicrobiota
GGA
Ser
>WENV170053708
CDZD01040366
512565
Verrucomicrobiota
GGC
Ala
>WENV170053028
CDZD01003073
174736
Verrucomicrobiota
GTA
Tyr
>WENV170053481
CDZD01029574
272566
Verrucomicrobiota
GTC
Asp
>WENV170053660
CDZD01038322
272566
Verrucomicrobiota
GTC
Asp
>WENV170053291
CDZD01019382
734926
Verrucomicrobiota
GTG
His
>WENV170053470
CDZD01029074
174735
Verrucomicrobiota
TAA
Leu
>WENV170053856
CDZD01048024
174735
Verrucomicrobiota
TAA
Leu
>WENV170053115
CDZD01006428
734924
Verrucomicrobiota
TAC
Val
>WENV170053872
CDZD01048622
204965
Verrucomicrobiota
TAG
Leu
>WENV170053111
CDZD01006407
872251
Verrucomicrobiota
TCC
Gly
>WENV170053653
CDZD01037846
99912
Verrucomicrobiota
TGA
Ser
>WENV170053113
CDZD01006407
309873
Verrucomicrobiota
TGG
Pro
>WENV170053463
CDZD01028421
734928
Verrucomicrobiota
TGT
Thr
>WENV170053780
CDZD01043516
734928
Verrucomicrobiota
TGT
Thr
>WENV170053290
CDZD01019382
512567
Verrucomicrobiota
TTC
Glu
>WENV170053462
CDZD01028421
512567
Verrucomicrobiota
TTC
Glu
>WENV170053779
CDZD01043516
512567
Verrucomicrobiota
TTC
Glu
>WENV170053920
CDZD01050489
512567
Verrucomicrobiota
TTC
Glu
>WENV170053710
CDZD01040366
734919
Verrucomicrobiota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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