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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078860
CDZV01042438
451336
Bacillota
GAA
Phe
>WENV170078123
CDZV01010644
458652
Bacillota
GCC
Gly
>WENV170078300
CDZV01017217
458652
Bacillota
GCC
Gly
>WENV170079064
CDZV01049913
275710
Bacillota
CCG
Arg
>WENV170078998
CDZV01046855
782131
Bacillota
GCA
Cys
>WENV170078004
CDZV01005347
463805
Bacillota
CGT
Thr
>WENV170078997
CDZV01046855
660007
Bacillota
GCC
Gly
>WENV170078392
CDZV01022862
284731
Bacillota
GTC
Asp
>WENV170078601
CDZV01031913
284731
Bacillota
GTC
Asp
>WENV170078228
CDZV01014602
465106
Bacillota
TGT
Thr
>WENV170078240
CDZV01014948
465106
Bacillota
TGT
Thr
>WENV170079268
CDZV01058775
465106
Bacillota
TGT
Thr
>WENV170079271
CDZV01059132
465106
Bacillota
TGT
Thr
>WENV170078891
CDZV01043146
285831
Bacillota
GTC
Asp
>WENV170078222
CDZV01014562
460662
Bacillota
GCC
Gly
>WENV170078639
CDZV01033437
460662
Bacillota
GCC
Gly
>WENV170078830
CDZV01041217
460662
Bacillota
GCC
Gly
>WENV170077973
CDZV01003767
270426
Bacillota
GAT
Ile
>WENV170078493
CDZV01027595
270426
Bacillota
GAT
Ile
>WENV170078022
CDZV01006450
282409
Bacillota
TGG
Pro
>WENV170078120
CDZV01010644
451367
Bacillota
TAC
Val
>WENV170078299
CDZV01017217
451367
Bacillota
TAC
Val
>WENV170078406
CDZV01023656
451367
Bacillota
TAC
Val
>WENV170078447
CDZV01025696
451367
Bacillota
TAC
Val
>WENV170078935
CDZV01044179
451367
Bacillota
TAC
Val
>WENV170079277
CDZV01059213
451367
Bacillota
TAC
Val
>WENV170078559
CDZV01030621
282349
Bacillota
GTC
Asp
>WENV170078633
CDZV01032948
282349
Bacillota
GTC
Asp
>WENV170079020
CDZV01047386
456796
Bacillota
GGC
Ala
>WENV170078265
CDZV01015962
279224
Bacillota
GAT
Ile
>WENV170079039
CDZV01048189
279224
Bacillota
GAT
Ile
>WENV170079027
CDZV01047460
273884
Bacillota
GAT
Ile
>WENV170079191
CDZV01055431
282469
Bacillota
GAC
Val
>WENV170078402
CDZV01023291
468336
Bacillota
GCC
Gly
>WENV170078451
CDZV01025709
468336
Bacillota
GCC
Gly
>WENV170077972
CDZV01003767
467963
Bacillota
TGC
Ala
>WENV170078945
CDZV01044656
282468
Bacillota
CGG
Pro
>WENV170079003
CDZV01047147
282468
Bacillota
CGG
Pro
>WENV170077900
CDZV01001438
465093
Bacillota
GCC
Gly
>WENV170078449
CDZV01025696
465093
Bacillota
GCC
Gly
>WENV170078988
CDZV01045972
465093
Bacillota
GCC
Gly
>WENV170077856
CDZV01000025
463801
Bacillota
TTC
Glu
>WENV170078984
CDZV01045869
463801
Bacillota
TTC
Glu
>WENV170079201
CDZV01056211
452811
Bacillota
TGC
Ala
>WENV170078708
CDZV01035692
282467
Bacillota
CCT
Arg
>WENV170078394
CDZV01022862
661891
Bacillota
GCC
Gly
>WENV170078568
CDZV01031362
661891
Bacillota
GCC
Gly
>WENV170078602
CDZV01031913
661891
Bacillota
GCC
Gly
>WENV170077857
CDZV01000025
461007
Bacillota
TAC
Val
>WENV170077940
CDZV01002439
659703
Bacillota
TTG
Gln
>WENV170079038
CDZV01047922
274813
Bacillota
ACG
Arg
>WENV170078503
CDZV01028290
281604
Bacillota
GGG
Pro
>WENV170078122
CDZV01010644
451395
Bacillota
GAA
Phe
>WENV170078408
CDZV01023656
451395
Bacillota
GAA
Phe
>WENV170078441
CDZV01025687
467075
Bacillota
TGC
Ala
>WENV170078603
CDZV01031913
466856
Bacillota
CCA
Trp
>WENV170077931
CDZV01002385
451375
Bacillota
GGC
Ala
>WENV170078038
CDZV01007352
451375
Bacillota
GGC
Ala
>WENV170078137
CDZV01011114
451375
Bacillota
GGC
Ala
>WENV170078481
CDZV01027119
451375
Bacillota
GGC
Ala
>WENV170078624
CDZV01032520
451375
Bacillota
GGC
Ala
>WENV170079017
CDZV01047382
451375
Bacillota
GGC
Ala
>WENV170079149
CDZV01053610
451375
Bacillota
GGC
Ala
>WENV170079276
CDZV01059211
451375
Bacillota
GGC
Ala
>WENV170079291
CDZV01059652
451375
Bacillota
GGC
Ala
>WENV170078768
CDZV01038270
461574
Bacillota
TGT
Thr
>WENV170077958
CDZV01002930
451334
Bacillota
TGT
Thr
>WENV170078171
CDZV01012204
451334
Bacillota
TGT
Thr
>WENV170078106
CDZV01010104
660211
Bacillota
CCG
Arg
>WENV170078925
CDZV01044047
780500
Bacillota
CCA
Trp
>WENV170077998
CDZV01005292
284784
Bacillota
GAT
Ile
>WENV170078109
CDZV01010191
284784
Bacillota
GAT
Ile
>WENV170077948
CDZV01002862
658259
Bacillota
CTC
Glu
>WENV170077968
CDZV01003323
285826
Bacillota
CAT
Met
>WENV170078347
CDZV01020466
285826
Bacillota
CAT
Met
>WENV170078712
CDZV01035703
285826
Bacillota
CAT
Met
>WENV170079086
CDZV01051289
285826
Bacillota
CAT
Met
>WENV170078381
CDZV01021993
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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