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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170096231
CEAK01009392
451336
Bacillota
GAA
Phe
>WENV170096155
CEAK01006082
275710
Bacillota
CCG
Arg
>WENV170096521
CEAK01020524
270416
Bacillota
CAC
Val
>WENV170096426
CEAK01016129
467910
Bacillota
TGC
Ala
>WENV170096229
CEAK01009382
86860
Bacillota
TGA
Ser
>WENV170096368
CEAK01014589
779387
Bacillota
TTG
Gln
>WENV170096799
CEAK01033534
779387
Bacillota
TTG
Gln
>WENV170096028
CEAK01001522
284731
Bacillota
GTC
Asp
>WENV170096104
CEAK01004246
284731
Bacillota
GTC
Asp
>WENV170096604
CEAK01024145
284731
Bacillota
GTC
Asp
>WENV170096191
CEAK01007494
465106
Bacillota
TGT
Thr
>WENV170096430
CEAK01016267
466790
Bacillota
CGG
Pro
>WENV170096788
CEAK01032779
466790
Bacillota
CGG
Pro
>WENV170096070
CEAK01002212
270426
Bacillota
GAT
Ile
>WENV170096327
CEAK01013105
451355
Bacillota
GAC
Val
>WENV170096715
CEAK01029487
451355
Bacillota
GAC
Val
>WENV170096832
CEAK01034596
451355
Bacillota
GAC
Val
>WENV170096839
CEAK01034721
451355
Bacillota
GAC
Val
>WENV170096170
CEAK01007072
279224
Bacillota
GAT
Ile
>WENV170096425
CEAK01016129
279224
Bacillota
GAT
Ile
>WENV170096759
CEAK01031630
661851
Bacillota
GCA
Cys
>WENV170096651
CEAK01026988
72851
Bacillota
TGA
Ser
>WENV170095982
CEAK01000128
270438
Bacillota
TCT
Arg
>WENV170096010
CEAK01000316
270438
Bacillota
TCT
Arg
>WENV170096572
CEAK01022796
451352
Bacillota
GGT
Thr
>WENV170096598
CEAK01023763
112239
Bacillota
CAG
Leu
>WENV170096037
CEAK01001531
779389
Bacillota
TCC
Gly
>WENV170096757
CEAK01031630
284668
Bacillota
GTC
Asp
>WENV170096267
CEAK01010376
466782
Bacillota
CCC
Gly
>WENV170096030
CEAK01001522
661891
Bacillota
GCC
Gly
>WENV170096105
CEAK01004246
661891
Bacillota
GCC
Gly
>WENV170096605
CEAK01024145
661891
Bacillota
GCC
Gly
>WENV170096792
CEAK01033049
661891
Bacillota
GCC
Gly
>WENV170096429
CEAK01016267
779385
Bacillota
CTG
Gln
>WENV170096782
CEAK01032531
779385
Bacillota
CTG
Gln
>WENV170096164
CEAK01006651
451357
Bacillota
CTT
Lys
>WENV170096590
CEAK01023459
451357
Bacillota
CTT
Lys
>WENV170096739
CEAK01030787
451414
Bacillota
TGC
Ala
>WENV170096168
CEAK01006933
20504
Bacillota
GGA
Ser
>WENV170096405
CEAK01015409
20504
Bacillota
GGA
Ser
>WENV170096503
CEAK01019906
20504
Bacillota
GGA
Ser
>WENV170096542
CEAK01021200
451384
Bacillota
TGG
Pro
>WENV170096106
CEAK01004246
466856
Bacillota
CCA
Trp
>WENV170096606
CEAK01024145
466856
Bacillota
CCA
Trp
>WENV170096354
CEAK01014409
451375
Bacillota
GGC
Ala
>WENV170096513
CEAK01020008
451375
Bacillota
GGC
Ala
>WENV170096099
CEAK01003921
270447
Bacillota
GTT
Asn
>WENV170096618
CEAK01025108
270447
Bacillota
GTT
Asn
>WENV170096647
CEAK01026689
270447
Bacillota
GTT
Asn
>WENV170096768
CEAK01031723
270447
Bacillota
GTT
Asn
>WENV170096589
CEAK01023459
653369
Bacillota
CTC
Glu
>WENV170096767
CEAK01031723
653369
Bacillota
CTC
Glu
>WENV170096232
CEAK01009392
451376
Bacillota
GCC
Gly
>WENV170096758
CEAK01031630
451376
Bacillota
GCC
Gly
>WENV170096552
CEAK01021531
653347
Bacillota
TGT
Thr
>WENV170096214
CEAK01008614
270405
Bacillota
ACG
Arg
>WENV170096374
CEAK01014704
270405
Bacillota
ACG
Arg
>WENV170096726
CEAK01030112
780500
Bacillota
CCA
Trp
>WENV170096286
CEAK01011239
454988
Bacillota
TGC
Ala
>WENV170096372
CEAK01014684
658259
Bacillota
CTC
Glu
>WENV170096505
CEAK01019950
658259
Bacillota
CTC
Glu
>WENV170096728
CEAK01030488
285826
Bacillota
CAT
Met
>WENV170096460
CEAK01017410
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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