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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170152163
CEOE01046582
273854
Gammaproteobacteria
CAT
Met
>WENV170152182
CEOE01048566
273854
Gammaproteobacteria
CAT
Met
>WENV170151840
CEOE01002359
273856
Gammaproteobacteria
GAC
Val
>WENV170151914
CEOE01006491
112813
Gammaproteobacteria
CAG
Leu
>WENV170151860
CEOE01003879
454967
Gammaproteobacteria
TTT
Lys
>WENV170152389
CEOE01105863
273847
Gammaproteobacteria
CCT
Arg
>WENV170152373
CEOE01102883
273857
Gammaproteobacteria
TGG
Pro
>WENV170152241
CEOE01057197
180498
Gammaproteobacteria
TAG
Leu
>WENV170152374
CEOE01102883
273858
Gammaproteobacteria
TCT
Arg
>WENV170152043
CEOE01023712
273845
Gammaproteobacteria
GGG
Pro
>WENV170152079
CEOE01030677
112814
Gammaproteobacteria
GAG
Leu
>WENV170152080
CEOE01030677
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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