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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170155629
CEOG01076849
452917
Alphaproteobacteria
TAC
Val
>WENV170155677
CEOG01089969
452884
Alphaproteobacteria
CCA
Trp
>WENV170155437
CEOG01030121
465413
Alphaproteobacteria
TGC
Ala
>WENV170155490
CEOG01036216
653534
Alphaproteobacteria
GCC
Gly
>WENV170155457
CEOG01034437
291540
Alphaproteobacteria
TGG
Pro
>WENV170155686
CEOG01094200
218119
Alphaproteobacteria
>WENV170155639
CEOG01079304
780661
Alphaproteobacteria
GCA
Cys
>WENV170155732
CEOG01104762
154065
Alphaproteobacteria
GAG
Leu
>WENV170155183
CEOG01000625
278344
Alphaproteobacteria
CAT
Met
>WENV170155361
CEOG01019825
453948
Alphaproteobacteria
GGC
Ala
>WENV170155623
CEOG01074892
274144
Alphaproteobacteria
GTG
His
>WENV170155569
CEOG01047388
655394
Alphaproteobacteria
GTT
Asn
>WENV170155240
CEOG01004419
274131
Alphaproteobacteria
CAT
Met
>WENV170155184
CEOG01000694
274142
Alphaproteobacteria
GAT
Ile
>WENV170155581
CEOG01057536
779636
Alphaproteobacteria
CTG
Gln
>WENV170155294
CEOG01012045
46072
Alphaproteobacteria
GCT
Ser
>WENV170155605
CEOG01070773
46222
Alphaproteobacteria
GGA
Ser
>WENV170155326
CEOG01016455
655361
Alphaproteobacteria
GCC
Gly
>WENV170155409
CEOG01027251
274133
Alphaproteobacteria
ACG
Arg
>WENV170155593
CEOG01066560
112839
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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