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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170202777
CEPS01005792
271464
Gammaproteobacteria
TGG
Pro
>WENV170202789
CEPS01006790
270982
Gammaproteobacteria
GAT
Ile
>WENV170202883
CEPS01011384
272023
Gammaproteobacteria
GAT
Ile
>WENV170202940
CEPS01014149
30353
Gammaproteobacteria
GGA
Ser
>WENV170203483
CEPS01056511
458351
Gammaproteobacteria
TTG
Gln
>WENV170203099
CEPS01023334
455405
Gammaproteobacteria
GGT
Thr
>WENV170202967
CEPS01015403
276976
Gammaproteobacteria
TCT
Arg
>WENV170203462
CEPS01054262
276973
Gammaproteobacteria
GAC
Val
>WENV170202773
CEPS01005694
275934
Gammaproteobacteria
GGG
Pro
>WENV170203987
CEPS01099544
276261
Gammaproteobacteria
CAT
Met
>WENV170203341
CEPS01044484
780765
Gammaproteobacteria
CCC
Gly
>WENV170203400
CEPS01048313
780765
Gammaproteobacteria
CCC
Gly
>WENV170203761
CEPS01084143
781121
Gammaproteobacteria
GCA
Cys
>WENV170203236
CEPS01035221
113485
Gammaproteobacteria
CAA
Leu
>WENV170203474
CEPS01055357
276972
Gammaproteobacteria
CCA
Trp
>WENV170202882
CEPS01011349
276970
Gammaproteobacteria
CCG
Arg
>WENV170202966
CEPS01015403
276975
Gammaproteobacteria
TGG
Pro
>WENV170202741
CEPS01003502
466186
Gammaproteobacteria
TGC
Ala
>WENV170202705
CEPS01001486
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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