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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170202741
CEPS01003502
513054
Gammaproteobacteria
TGC
Ala
>WENV170202790
CEPS01006790
509616
Gammaproteobacteria
TGC
Ala
>WENV170202883
CEPS01011384
313321
Gammaproteobacteria
GAT
Ile
>WENV170202966
CEPS01015403
310412
Gammaproteobacteria
TGG
Pro
>WENV170202967
CEPS01015403
310413
Gammaproteobacteria
TCT
Arg
>WENV170203099
CEPS01023334
508624
Gammaproteobacteria
GGT
Thr
>WENV170203171
CEPS01030512
319097
Gammaproteobacteria
>WENV170203236
CEPS01035221
129690
Gammaproteobacteria
CAA
Leu
>WENV170203341
CEPS01044484
873775
Gammaproteobacteria
CCC
Gly
>WENV170203400
CEPS01048313
873775
Gammaproteobacteria
CCC
Gly
>WENV170203474
CEPS01055357
308318
Gammaproteobacteria
CCA
Trp
>WENV170203861
CEPS01092568
518063
Gammaproteobacteria
GTT
Asn
>WENV170203987
CEPS01099544
309610
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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