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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260281
CEQZ01006436
486408
Gammaproteobacteria
GTT
Asn
>WENV170260317
CEQZ01011631
275465
Gammaproteobacteria
GAC
Val
>WENV170260452
CEQZ01044269
273863
Gammaproteobacteria
GGG
Pro
>WENV170260222
CEQZ01002121
451916
Gammaproteobacteria
TTC
Glu
>WENV170260254
CEQZ01004115
30353
Gammaproteobacteria
GGA
Ser
>WENV170260400
CEQZ01019140
456706
Gammaproteobacteria
TGT
Thr
>WENV170260183
CEQZ01000058
454388
Gammaproteobacteria
TAC
Val
>WENV170260338
CEQZ01014147
451784
Gammaproteobacteria
GAA
Phe
>WENV170260198
CEQZ01000801
12379
Gammaproteobacteria
GCT
Ser
>WENV170260201
CEQZ01001060
271458
Gammaproteobacteria
GGG
Pro
>WENV170260214
CEQZ01001858
452416
Gammaproteobacteria
TTT
Lys
>WENV170260186
CEQZ01000136
273857
Gammaproteobacteria
TGG
Pro
>WENV170260267
CEQZ01005558
273844
Gammaproteobacteria
CCG
Arg
>WENV170260387
CEQZ01018192
656404
Gammaproteobacteria
TTG
Gln
>WENV170260230
CEQZ01002526
282413
Gammaproteobacteria
ACG
Arg
>WENV170260231
CEQZ01002526
282413
Gammaproteobacteria
ACG
Arg
>WENV170260355
CEQZ01016330
673293
Gammaproteobacteria
TTT
Lys
>WENV170260241
CEQZ01002956
218101
Gammaproteobacteria
GTA
Tyr
>WENV170260271
CEQZ01005955
180498
Gammaproteobacteria
TAG
Leu
>WENV170260333
CEQZ01013471
273859
Gammaproteobacteria
CGG
Pro
>WENV170260478
CEQZ01051161
273869
Gammaproteobacteria
GTT
Asn
>WENV170260215
CEQZ01001862
454968
Gammaproteobacteria
TAC
Val
>WENV170260217
CEQZ01001862
454968
Gammaproteobacteria
TAC
Val
>WENV170260265
CEQZ01005346
271456
Gammaproteobacteria
ACG
Arg
>WENV170260396
CEQZ01018206
458525
Gammaproteobacteria
TAC
Val
>WENV170260250
CEQZ01003275
454969
Gammaproteobacteria
GTT
Asn
>WENV170260251
CEQZ01003275
454969
Gammaproteobacteria
GTT
Asn
>WENV170260339
CEQZ01014217
273845
Gammaproteobacteria
GGG
Pro
>WENV170260246
CEQZ01003192
655385
Gammaproteobacteria
GCC
Gly
>WENV170260216
CEQZ01001862
273852
Gammaproteobacteria
GTC
Asp
>WENV170260279
CEQZ01006401
112814
Gammaproteobacteria
GAG
Leu
>WENV170260280
CEQZ01006401
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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