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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170287339
CERX01013396
275457
Gammaproteobacteria
ACG
Arg
>WENV170289580
CERX01194605
656944
Gammaproteobacteria
CCT
Arg
>WENV170289186
CERX01148487
474520
Gammaproteobacteria
CCA
Trp
>WENV170287220
CERX01006646
270982
Gammaproteobacteria
GAT
Ile
>WENV170288823
CERX01125394
456706
Gammaproteobacteria
TGT
Thr
>WENV170287178
CERX01004513
276974
Gammaproteobacteria
GGG
Pro
>WENV170287489
CERX01022160
457171
Gammaproteobacteria
GTT
Asn
>WENV170288147
CERX01071309
457171
Gammaproteobacteria
GTT
Asn
>WENV170288230
CERX01077466
273749
Gammaproteobacteria
CCA
Trp
>WENV170288765
CERX01121551
273749
Gammaproteobacteria
CCA
Trp
>WENV170287431
CERX01018363
452332
Gammaproteobacteria
GTG
His
>WENV170288205
CERX01075272
655197
Gammaproteobacteria
TTG
Gln
>WENV170289864
CERX01279057
278982
Gammaproteobacteria
CCG
Arg
>WENV170289024
CERX01139512
87214
Gammaproteobacteria
GGA
Ser
>WENV170288780
CERX01123045
218101
Gammaproteobacteria
GTA
Tyr
>WENV170288204
CERX01075272
454424
Gammaproteobacteria
GAA
Phe
>WENV170288709
CERX01116126
474503
Gammaproteobacteria
GTT
Asn
>WENV170287256
CERX01008846
273859
Gammaproteobacteria
CGG
Pro
>WENV170288908
CERX01131883
454968
Gammaproteobacteria
TAC
Val
>WENV170287365
CERX01014698
452377
Gammaproteobacteria
GTT
Asn
>WENV170288494
CERX01098795
113485
Gammaproteobacteria
CAA
Leu
>WENV170289607
CERX01206582
780241
Gammaproteobacteria
GCA
Cys
>WENV170287413
CERX01017143
271613
Gammaproteobacteria
GTC
Asp
>WENV170288227
CERX01077045
112371
Gammaproteobacteria
CAA
Leu
>WENV170287487
CERX01021979
276972
Gammaproteobacteria
CCA
Trp
>WENV170288909
CERX01131883
273852
Gammaproteobacteria
GTC
Asp
>WENV170287817
CERX01045115
112814
Gammaproteobacteria
GAG
Leu
>WENV170289784
CERX01265079
276970
Gammaproteobacteria
CCG
Arg
>WENV170289058
CERX01141613
30792
Gammaproteobacteria
GGA
Ser
>WENV170287818
CERX01045115
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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