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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170287339
CERX01013396
307285
Gammaproteobacteria
ACG
Arg
>WENV170288494
CERX01098795
129690
Gammaproteobacteria
CAA
Leu
>WENV170289846
CERX01275545
307281
Gammaproteobacteria
CAT
Met
>WENV170287487
CERX01021979
308318
Gammaproteobacteria
CCA
Trp
>WENV170287978
CERX01057905
513927
Gammaproteobacteria
CCA
Trp
>WENV170288230
CERX01077466
309372
Gammaproteobacteria
CCA
Trp
>WENV170288765
CERX01121551
309372
Gammaproteobacteria
CCA
Trp
>WENV170289186
CERX01148487
513099
Gammaproteobacteria
CCA
Trp
>WENV170289864
CERX01279057
326321
Gammaproteobacteria
CCG
Arg
>WENV170289144
CERX01146150
53066
Gammaproteobacteria
CGA
Ser
>WENV170287256
CERX01008846
307078
Gammaproteobacteria
CGG
Pro
>WENV170288347
CERX01088249
326361
Gammaproteobacteria
CGG
Pro
>WENV170287817
CERX01045115
128055
Gammaproteobacteria
GAG
Leu
>WENV170288580
CERX01105996
880399
Gammaproteobacteria
GCA
Cys
>WENV170289607
CERX01206582
871522
Gammaproteobacteria
GCA
Cys
>WENV170289024
CERX01139512
99969
Gammaproteobacteria
GGA
Ser
>WENV170288158
CERX01072147
529847
Gammaproteobacteria
GGT
Thr
>WENV170288589
CERX01106656
204389
Gammaproteobacteria
GTA
Tyr
>WENV170288780
CERX01123045
247205
Gammaproteobacteria
GTA
Tyr
>WENV170287970
CERX01056988
205306
Gammaproteobacteria
GTA
Tyr
>WENV170287413
CERX01017143
307284
Gammaproteobacteria
GTC
Asp
>WENV170288909
CERX01131883
307080
Gammaproteobacteria
GTC
Asp
>WENV170287431
CERX01018363
507094
Gammaproteobacteria
GTG
His
>WENV170287365
CERX01014698
512464
Gammaproteobacteria
GTT
Asn
>WENV170287489
CERX01022160
516032
Gammaproteobacteria
GTT
Asn
>WENV170288147
CERX01071309
516032
Gammaproteobacteria
GTT
Asn
>WENV170288298
CERX01082690
509621
Gammaproteobacteria
GTT
Asn
>WENV170288709
CERX01116126
543701
Gammaproteobacteria
GTT
Asn
>WENV170289608
CERX01206582
129381
Gammaproteobacteria
TAA
Leu
>WENV170288908
CERX01131883
512492
Gammaproteobacteria
TAC
Val
>WENV170288590
CERX01106656
871574
Gammaproteobacteria
TCC
Gly
>WENV170289294
CERX01154165
53065
Gammaproteobacteria
TGA
Ser
>WENV170288831
CERX01126053
509616
Gammaproteobacteria
TGC
Ala
>WENV170287366
CERX01014698
307282
Gammaproteobacteria
TGG
Pro
>WENV170288823
CERX01125394
509623
Gammaproteobacteria
TGT
Thr
>WENV170288205
CERX01075272
735199
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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