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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170342316
CETD01106039
271464
Gammaproteobacteria
TGG
Pro
>WENV170343217
CETD01351218
656944
Gammaproteobacteria
CCT
Arg
>WENV170342236
CETD01093726
276974
Gammaproteobacteria
GGG
Pro
>WENV170341497
CETD01012369
276971
Gammaproteobacteria
ACG
Arg
>WENV170341649
CETD01026451
276973
Gammaproteobacteria
GAC
Val
>WENV170342111
CETD01078368
276973
Gammaproteobacteria
GAC
Val
>WENV170342968
CETD01190309
278982
Gammaproteobacteria
CCG
Arg
>WENV170342864
CETD01186189
456510
Gammaproteobacteria
GGC
Ala
>WENV170341845
CETD01044778
113737
Gammaproteobacteria
CAA
Leu
>WENV170342097
CETD01076548
113485
Gammaproteobacteria
CAA
Leu
>WENV170341531
CETD01015785
452881
Gammaproteobacteria
TGT
Thr
>WENV170341583
CETD01020494
276972
Gammaproteobacteria
CCA
Trp
>WENV170342038
CETD01068067
276972
Gammaproteobacteria
CCA
Trp
>WENV170341664
CETD01028480
276970
Gammaproteobacteria
CCG
Arg
>WENV170342701
CETD01169460
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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