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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170361923
CETM01035704
281965
Gammaproteobacteria
TCT
Arg
>WENV170361313
CETM01001837
273856
Gammaproteobacteria
GAC
Val
>WENV170361318
CETM01002072
270982
Gammaproteobacteria
GAT
Ile
>WENV170361552
CETM01013314
270982
Gammaproteobacteria
GAT
Ile
>WENV170361901
CETM01034234
112813
Gammaproteobacteria
CAG
Leu
>WENV170363374
CETM01154397
456706
Gammaproteobacteria
TGT
Thr
>WENV170362427
CETM01070855
271252
Gammaproteobacteria
CAT
Met
>WENV170361813
CETM01029579
298951
Gammaproteobacteria
GAT
Ile
>WENV170364957
CETM01456837
457171
Gammaproteobacteria
GTT
Asn
>WENV170361833
CETM01030111
12379
Gammaproteobacteria
GCT
Ser
>WENV170361773
CETM01027326
273756
Gammaproteobacteria
TGG
Pro
>WENV170361922
CETM01035704
273756
Gammaproteobacteria
TGG
Pro
>WENV170362719
CETM01095536
273749
Gammaproteobacteria
CCA
Trp
>WENV170361370
CETM01004265
459789
Gammaproteobacteria
GTT
Asn
>WENV170361371
CETM01004265
459789
Gammaproteobacteria
GTT
Asn
>WENV170361372
CETM01004265
459789
Gammaproteobacteria
GTT
Asn
>WENV170362249
CETM01057578
276973
Gammaproteobacteria
GAC
Val
>WENV170363629
CETM01175750
276973
Gammaproteobacteria
GAC
Val
>WENV170361460
CETM01009274
273853
Gammaproteobacteria
CAT
Met
>WENV170361295
CETM01000453
278982
Gammaproteobacteria
CCG
Arg
>WENV170361903
CETM01034351
278982
Gammaproteobacteria
CCG
Arg
>WENV170364681
CETM01391342
780765
Gammaproteobacteria
CCC
Gly
>WENV170361795
CETM01028070
465220
Gammaproteobacteria
GCC
Gly
>WENV170362089
CETM01045028
180482
Gammaproteobacteria
GAG
Leu
>WENV170362675
CETM01091459
113235
Gammaproteobacteria
GAG
Leu
>WENV170361944
CETM01036432
780241
Gammaproteobacteria
GCA
Cys
>WENV170361956
CETM01037278
454425
Gammaproteobacteria
TGT
Thr
>WENV170361725
CETM01024789
456265
Gammaproteobacteria
TGT
Thr
>WENV170362223
CETM01056378
276972
Gammaproteobacteria
CCA
Trp
>WENV170361531
CETM01012410
112884
Gammaproteobacteria
CAG
Leu
>WENV170361534
CETM01012410
112884
Gammaproteobacteria
CAG
Leu
>WENV170361294
CETM01000430
456267
Gammaproteobacteria
GAA
Phe
>WENV170363818
CETM01190079
87460
Gammaproteobacteria
GGA
Ser
>WENV170361776
CETM01027464
30792
Gammaproteobacteria
GGA
Ser
>WENV170364815
CETM01439768
655145
Gammaproteobacteria
CCT
Arg
>WENV170361446
CETM01008608
271253
Gammaproteobacteria
CAT
Met
>WENV170361448
CETM01008608
271253
Gammaproteobacteria
CAT
Met
>WENV170362006
CETM01041038
271253
Gammaproteobacteria
CAT
Met
>WENV170362676
CETM01091459
271253
Gammaproteobacteria
CAT
Met
>WENV170363380
CETM01154835
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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