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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170385846
CETY01107958
456271
Gammaproteobacteria
GCC
Gly
>WENV170385848
CETY01107958
456271
Gammaproteobacteria
GCC
Gly
>WENV170385742
CETY01097578
276974
Gammaproteobacteria
GGG
Pro
>WENV170386859
CETY01198055
458351
Gammaproteobacteria
TTG
Gln
>WENV170387638
CETY01454797
297860
Gammaproteobacteria
GAC
Val
>WENV170384741
CETY01011021
30865
Gammaproteobacteria
GCT
Ser
>WENV170384742
CETY01011021
276971
Gammaproteobacteria
ACG
Arg
>WENV170384743
CETY01011021
276971
Gammaproteobacteria
ACG
Arg
>WENV170385935
CETY01117122
455405
Gammaproteobacteria
GGT
Thr
>WENV170386860
CETY01198055
276973
Gammaproteobacteria
GAC
Val
>WENV170386589
CETY01183726
271287
Gammaproteobacteria
CAT
Met
>WENV170386874
CETY01198138
278982
Gammaproteobacteria
CCG
Arg
>WENV170387144
CETY01336171
273327
Gammaproteobacteria
ACG
Arg
>WENV170386873
CETY01198134
273754
Gammaproteobacteria
GTT
Asn
>WENV170385847
CETY01107958
465222
Gammaproteobacteria
GCC
Gly
>WENV170385031
CETY01032992
459731
Gammaproteobacteria
GGT
Thr
>WENV170385738
CETY01097524
459731
Gammaproteobacteria
GGT
Thr
>WENV170386870
CETY01198105
113485
Gammaproteobacteria
CAA
Leu
>WENV170385691
CETY01093789
452881
Gammaproteobacteria
TGT
Thr
>WENV170386831
CETY01197625
455974
Gammaproteobacteria
GTG
His
>WENV170387539
CETY01447042
276972
Gammaproteobacteria
CCA
Trp
>WENV170385303
CETY01056748
454397
Gammaproteobacteria
TGT
Thr
>WENV170386827
CETY01197579
454941
Gammaproteobacteria
GGT
Thr
>WENV170385929
CETY01116962
466510
Gammaproteobacteria
GCC
Gly
>WENV170386232
CETY01147483
276372
Gammaproteobacteria
ACG
Arg
>WENV170386808
CETY01197243
30792
Gammaproteobacteria
GGA
Ser
>WENV170386721
CETY01192594
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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