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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170385847
CETY01107958
509448
Gammaproteobacteria
GCC
Gly
>WENV170386232
CETY01147483
305296
Gammaproteobacteria
ACG
Arg
>WENV170387638
CETY01454797
306447
Gammaproteobacteria
GAC
Val
>WENV170387539
CETY01447042
308318
Gammaproteobacteria
CCA
Trp
>WENV170385624
CETY01085698
513927
Gammaproteobacteria
CCA
Trp
>WENV170386870
CETY01198105
129690
Gammaproteobacteria
CAA
Leu
>WENV170386874
CETY01198138
326321
Gammaproteobacteria
CCG
Arg
>WENV170386831
CETY01197625
510470
Gammaproteobacteria
GTG
His
>WENV170387144
CETY01336171
323834
Gammaproteobacteria
ACG
Arg
>WENV170387133
CETY01331958
514134
Gammaproteobacteria
TGT
Thr
>WENV170385846
CETY01107958
508625
Gammaproteobacteria
GCC
Gly
>WENV170385848
CETY01107958
508625
Gammaproteobacteria
GCC
Gly
>WENV170386721
CETY01192594
314409
Gammaproteobacteria
GTC
Asp
>WENV170385031
CETY01032992
508125
Gammaproteobacteria
GGT
Thr
>WENV170385738
CETY01097524
508125
Gammaproteobacteria
GGT
Thr
>WENV170386176
CETY01140373
509616
Gammaproteobacteria
TGC
Ala
>WENV170385501
CETY01073132
319326
Gammaproteobacteria
CAT
Met
>WENV170386827
CETY01197579
509481
Gammaproteobacteria
GGT
Thr
>WENV170385935
CETY01117122
508624
Gammaproteobacteria
GGT
Thr
>WENV170385303
CETY01056748
512941
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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