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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV005410
EU067481
86857
Bacteroidota
TAA
Leu
>ENV001481
AY933592
285054
Bacteroidota
GAT
Ile
>ENV001511
AY933607
285054
Bacteroidota
GAT
Ile
>ENV004279
DQ646394
285054
Bacteroidota
GAT
Ile
>ENV000731
AJ937771
456730
Bacteroidota
TTT
Lys
>ENV005362
EU062567
87355
Bacteroidota
TGA
Ser
>ENV005380
EU064307
87355
Bacteroidota
TGA
Ser
>ENV000118
AC149043
280689
Bacteroidota
TGC
Ala
>ENV004045
DQ227614
280689
Bacteroidota
TGC
Ala
>ENV005397
EU066570
283435
Bacteroidota
GAT
Ile
>ENV000116
AC149043
185776
Bacteroidota
TAG
Leu
>ENV005416
EU067686
86859
Bacteroidota
TGA
Ser
>ENV005393
EU066106
240600
Bacteroidota
GGG
Pro
>ENV005324
EU058573
30567
Bacteroidota
GGA
Ser
>ENV003665
DQ009393
280824
Bacteroidota
TGC
Ala
>ENV003202
DQ009115
280824
Bacteroidota
TGC
Ala
>ENV005398
EU066668
276430
Bacteroidota
CAT
Met
>ENV000952
AY212800
456222
Bacteroidota
CAT
Met
>ENV001510
AY933606
272325
Bacteroidota
TGC
Ala
>ENV003140
DQ009083
272325
Bacteroidota
TGC
Ala
>ENV003164
DQ009096
272325
Bacteroidota
TGC
Ala
>ENV003659
DQ009390
272325
Bacteroidota
TGC
Ala
>ENV003671
DQ009396
272325
Bacteroidota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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