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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170577582
FSSH01000226
454388
Gammaproteobacteria
TAC
Val
>WENV170577589
FSSH01000240
454392
Gammaproteobacteria
TTT
Lys
>WENV170577899
FSSH01002527
273532
Gammaproteobacteria
TGG
Pro
>WENV170577903
FSSH01002527
180778
Gammaproteobacteria
TAG
Leu
>WENV170577446
FSSH01000017
30481
Gammaproteobacteria
GCT
Ser
>WENV170577576
FSSH01000217
454396
Gammaproteobacteria
TTC
Glu
>WENV170577577
FSSH01000217
454396
Gammaproteobacteria
TTC
Glu
>WENV170577448
FSSH01000017
454394
Gammaproteobacteria
GTT
Asn
>WENV170577481
FSSH01000056
454389
Gammaproteobacteria
GAA
Phe
>WENV170577482
FSSH01000056
454389
Gammaproteobacteria
GAA
Phe
>WENV170577659
FSSH01000444
452579
Gammaproteobacteria
TGC
Ala
>WENV170577661
FSSH01000469
452579
Gammaproteobacteria
TGC
Ala
>WENV170577486
FSSH01000063
273325
Gammaproteobacteria
TGG
Pro
>WENV170577658
FSSH01000444
273322
Gammaproteobacteria
GAT
Ile
>WENV170577523
FSSH01000114
454387
Gammaproteobacteria
CCA
Trp
>WENV170577447
FSSH01000017
273327
Gammaproteobacteria
ACG
Arg
>WENV170578150
FSSH01039892
655125
Gammaproteobacteria
TTG
Gln
>WENV170577808
FSSH01001429
474623
Gammaproteobacteria
GGT
Thr
>WENV170577489
FSSH01000063
273321
Gammaproteobacteria
CCG
Arg
>WENV170577959
FSSH01003770
273321
Gammaproteobacteria
CCG
Arg
>WENV170577487
FSSH01000063
273326
Gammaproteobacteria
TCT
Arg
>WENV170577521
FSSH01000114
780093
Gammaproteobacteria
TCC
Gly
>WENV170577938
FSSH01003444
780093
Gammaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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